PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.04G230600.6.p
Common NameGLYMA_04G230600
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family GRF
Protein Properties Length: 454aa    MW: 48965.6 Da    PI: 9.2285
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.04G230600.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC78.94.8e-2565108144
                  WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                          d+epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e
  Glyma.04G230600.6.p  65 DPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVE 108
                          79***************************************998 PP
2QLQ54.53.4e-19840234
                  QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34
                         +FT aQ+ +L++Q+++yKy++a++PvPp+Ll +
  Glyma.04G230600.6.p  8 PFTSAQWRELERQAMIYKYMMASVPVPPDLLIP 40
                         8*****************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009518.6E-11743IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166620.948843IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.3E-13840IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.73965109IPR014977WRC domain
PfamPF088791.5E-2066108IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MAASLGFPFT SAQWRELERQ AMIYKYMMAS VPVPPDLLIP TSLTSSSRSS CMDGGFNLRL  60
ANSTDPEPGR CRRTDGKKWR CSRDVAPNHK YCERHMHRGR PRSRKPVEVN TNTTPTSINN  120
NNNNHQIKRA RHECNNPFAT PDVAVAISNP TSRKGESSSH FLGSTTTQPY LKSPLCLANF  180
GLKAASFDSV ASVSANKEPR GLEWMLNGDP ISLDASNSQW QSLMHNKVGM SSVSSCNTTE  240
SQYLNSFALY SSGLEQQNRR HPLFLNPLLV PMKNLQPEKP RGFIDAWSNA ETAQSNANTN  300
NKNSAASIGK LSLSSLDLSM GGGAVSEDVD NVNMGLGLME TYGKTHTDTK ISLSNWHNPA  360
PWVASSSTLG GPLAEVLRSS TVTATTNEAT SNATSSPATT THAESNSPLG TMVSSPSGVL  420
QKTLISLSDS SNNSSPTVAS SRANSEMAFL RFQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.04G230600.6.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003522532.10.0growth-regulating factor 7 isoform X2
RefseqXP_028229899.10.0growth-regulating factor 7-like isoform X2
TrEMBLA0A0R0KBL40.0A0A0R0KBL4_SOYBN; Uncharacterized protein
STRINGGLYMA04G40880.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.17e-36growth-regulating factor 7