PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G255000.1.p
Common NameGLYMA_03G255000
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 426aa    MW: 45627.6 Da    PI: 8.2266
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G255000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.62.4e-22280342163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L aeN +Lk+e+++l++ ++k++ e+
  Glyma.03G255000.1.p 280 ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEINRLTESSEKMRVEN 342
                          89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.8E-361101IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.1E-26134263No hitNo description
Gene3DG3DSA:1.20.5.1704.8E-17275339No hitNo description
PfamPF001703.4E-20280342IPR004827Basic-leucine zipper domain
SMARTSM003382.6E-21280344IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.415282345IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-10283338No hitNo description
CDDcd147022.71E-21285333No hitNo description
PROSITE patternPS000360287302IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MGNSEEEKST KTEKPSSPVT MDQANQTNQT NIHVYPDWAA MQAYYGPRVT MPPYYNSAVA  60
SGHAPHPYMW GPPQVPMMPP YGPPYAAIYP HGGVYTHPAV PIGPLTHSQG VPSSPAAGTP  120
LSIETPPKSS GNTDQGLMKK LKEFDGLAMS IGNGHAESAE RGGENRLSQS VDTEGSSDGS  180
DGNTSGANQS RRKRSREGTP TTDGEGKTEI QGSPISKETA ASNKMLGVVP ASVAGTIVGH  240
VVSSGMTTAL ELRNPSSVHS KTSAPQPCPV LPAEAWVQNE RELKRERRKQ SNRESARRSR  300
LRKQAETEEL ARKVESLNAE NATLKSEINR LTESSEKMRV ENATLRGKLK NAQLGQTQEI  360
TLKIIDSQRA TPVSTENLLS RVNNSGSNDR TVEDENGFCE NKPNSGAKLH QLLDTSPRAD  420
AVAAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1296302RRSRLRK
2296303RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.328760.0cotyledon| epicotyl| hypocotyl| leaf
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G255000.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311450.0KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001336230.10.0bZIP transcription factor bZIP77 isoform 1
RefseqXP_025983484.10.0bZIP transcription factor bZIP77 isoform X1
RefseqXP_025983485.10.0bZIP transcription factor bZIP77 isoform X1
RefseqXP_028226821.10.0common plant regulatory factor 1-like isoform X1
RefseqXP_028226822.10.0common plant regulatory factor 1-like isoform X1
RefseqXP_028226823.10.0common plant regulatory factor 1-like isoform X1
SwissprotQ990891e-146CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A445LHC30.0A0A445LHC3_GLYSO; Uncharacterized protein
TrEMBLI1JRX00.0I1JRX0_SOYBN; Uncharacterized protein
STRINGGLYMA03G41590.50.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Representative plantOGRP43461123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-104G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]