PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.02G100700.1.p | ||||||||
Common Name | GLYMA_02G100700, LOC100812321 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 373aa MW: 41041.2 Da PI: 6.7058 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.5e-13 | 180 | 226 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++ +k+L Glyma.02G100700.1.p 180 KSHSEAERRRRERINNHLAKLRSLLPNT-----TKTDKASLLAEVIQQVKEL 226 79*************************9.....8***********9988887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 16.679 | 177 | 226 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.6E-10 | 180 | 226 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.1E-13 | 181 | 236 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.54E-14 | 181 | 234 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.2E-12 | 183 | 232 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.52E-4 | 190 | 229 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence Send to blast |
MKKELEDQGQ CSSPPIINNN IQSYQEHLLL QQQMQQNSDI FGGGGGSKGL MFPPEVVSSI 60 LQQQPWSIPP VPSFNPNPVH YNNTNPVHHH EQASSFLVPP PTTTPSPYAS FFSSRRVVPS 120 LHFAYEGPSS HHDHHHLRII SDTLGPMVQP GSAAPFGLQA ELGRMTAQEI MEAKALAASK 180 SHSEAERRRR ERINNHLAKL RSLLPNTTKT DKASLLAEVI QQVKELKRQT SLIVEMSTVP 240 TESDELTVDA IDEDGKFVIK ASLCCEDRSD LLPDLIKTLK ALRLRTLRAE ITSLGGRVKN 300 VLVITGDEEE NSNTNNGEQS MQQQYCISSI QEALKAVMEK SGGGDESASG NVKRQRTTTT 360 NNKINILEQS SL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 185 | 190 | ERRRRE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.02G100700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003520049.1 | 0.0 | transcription factor bHLH30 | ||||
Refseq | XP_025980979.1 | 0.0 | transcription factor bHLH30 | ||||
Swissprot | Q9S7Y1 | 1e-111 | BH030_ARATH; Transcription factor bHLH30 | ||||
TrEMBL | K7K7G7 | 0.0 | K7K7G7_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA02G11190.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4589 | 34 | 58 | Representative plant | OGRP377 | 15 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 8e-90 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.02G100700.1.p |
Entrez Gene | 100812321 |
Publications ? help Back to Top | |||
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