PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D13G2405
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 317aa    MW: 35595.8 Da    PI: 7.6022
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D13G2405genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.41.7e-09235280548
                  CHHHCHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKka..eieeLeekvkeLeaeNkaLkke 48 
                  +r rrk+kNRe+A rsR+RK+a  +  eL +kv  Le+ N +Lk e
  Gh_D13G2405 235 RRLRRKIKNRESAARSRARKQAraYHNELVNKVSRLEEDNLKLKRE 280
                  5889****************97225689************999977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-8230294No hitNo description
SMARTSM003380.002231298IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-6235283No hitNo description
CDDcd147071.94E-15235291No hitNo description
PfamPF001707.4E-8235282IPR004827Basic-leucine zipper domain
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MGIQTMGSQS NGQQSLLQPS PLVRQNSWYS LTLNEVENQL GNLGKPLGSM NLDELLDNVW  60
STELNPPLGM NNTESISSSS SSLQRQASLT LARALSGKTV DQVWSEIQQG QKRRYGEGIK  120
DQEREAMLGE TTLEDFLVQA GLFVAETSLD PTMEFDNTRQ QSLPHQFGLS PTPSIGTLSD  180
TPMTRQKRDV FEKSIESLPQ QFGLSPTPSI GTLSDTPMTG RKRDAQDAFE KSIERRLRRK  240
IKNRESAARS RARKQARAYH NELVNKVSRL EEDNLKLKRE KEFDTKSQCE TSETRIPAHA  300
KGPDAAYVDN YMREKTS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016724194.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_016724195.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0D2VKL30.0A0A0D2VKL3_GOSRA; Uncharacterized protein
STRINGGorai.013G266400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM167141012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.13e-39ABA-responsive element binding protein 3