PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D12G0371
Common NameWRKY81
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 442aa    MW: 48976.4 Da    PI: 6.1676
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D12G0371genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.12.3e-30236295159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  Gh_D12G0371 236 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 295
                  58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-32221297IPR003657WRKY domain
SuperFamilySSF1182901.09E-27229297IPR003657WRKY domain
PROSITE profilePS5081128.988231297IPR003657WRKY domain
SMARTSM007743.2E-37236296IPR003657WRKY domain
PfamPF031063.3E-27237295IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MEMDLSLKVD SKEKEEDMEE SMDSKMQVEE AEAAEDKEVT SMAAAGEVED VDAPLELSLQ  60
GNNKTHELSV LQLEMNRMKE ENKVLRKVVE KTMQDYYDLQ MKFAVIQKND HKQDPPIFLS  120
LNGNGNGNGN SSQDQQPIQR SLNIGSHQKH GSSEGDHNDE NNEEELGLSL RLQISSSQRE  180
REEEHNKEGS EETPNVASEQ NKLQPTCLSA ITSHAVSPPN RKARVSVRAR CQTATMNDGC  240
QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCLED MSILITTYEG THNHPLPVGA  300
TAMASTASAA ADSFMFLDSS NPLSNGIPNL SQASLPYQNH PHLMKSHRNV MNFTDPSKGS  360
ILDLTNNRHV NHHFPTASSS SSHHPSPAFP WMPSRLSNGT SSRQWKSQED KSLAENVTAI  420
ASDPKFRVAV AAAITSLINK ES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-22223299176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6698300.0KF669830.1 Gossypium hirsutum WRKY transcription factor 81 (WRKY81) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012436449.10.0PREDICTED: probable WRKY transcription factor 9
SwissprotQ9C9F07e-82WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A068LIA80.0A0A068LIA8_GOSHI; WRKY transcription factor 81
STRINGGorai.008G041400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM67362741
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.11e-68WRKY DNA-binding protein 9
Publications ? help Back to Top
  1. Dou L, et al.
    Genome-wide analysis of the WRKY gene family in cotton.
    Mol. Genet. Genomics, 2014. 289(6): p. 1103-21
    [PMID:24942461]