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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gh_D11G0373 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
bHLH |
| Protein Properties |
Length: 550aa MW: 60233.9 Da PI: 8.4398 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D11G0373 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14.4 | 6.7e-05 | 271 | 298 | 24 | 55 |
HCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 24 rellPkaskapskKlsKaeiLekAveYIksLq 55
r ++P++ ++K +Ka+ L +++eYI+ Lq
Gh_D11G0373 271 RNIIPNS----DQKRDKASFLLEVIEYIQFLQ 298
6788887....9*******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006351 | Biological Process | transcription, DNA-templated |
| GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway |
| GO:1902448 | Biological Process | positive regulation of shade avoidance |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 550 aa
Download sequence Send
to blast |
MELPQSRPFG AEGRKPTHDF LSLYSHSSVQ QDPRPPSQGG YLKTRDFLQL EQQGNPSAKK 60
EISVEVATVE MPTPPSVEHI LPGGIGTYSI SHVSYFNPRV PKSEGAVFTV AEGSSTERND 120
ENSNCSSYTG SGFTLWEETA GKKGKTGKEN AGETPFVRDA AGKVGHWATS SLEKGTQSST 180
NNHPKSYSCL SSSQPSSKQK RQSFMEMIKS AKGSSQDDDF EEDEDFVLKK ESSTTTHNIG 240
ELRVKVDGKS VPDQKANTPR SKHSATEQRR RNIIPNSDQK RDKASFLLEV IEYIQFLQER 300
VHKYEGTYQG WSHVPSKLIP WRSNQRPTEN YADQSRAING VSAPSVVFPT KLDDGNINIT 360
PTIRESAENP IEPNKSRATT FRAMDLTPGM MNKTMPFPVS LQPNFFNTAQ NTVPATQIPP 420
RLPSDAENNA SQPQPVPCHT GSCTANGALP SEKLKEQELT IEGGKINISS LYSQRLLNTL 480
TQALQTSGLD LSQASISVQI ELGKQSSNRP TAPTSTLKDT TAAPSTHQGK TRPRVGCGED 540
SDQPLKKLKA
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots. {ECO:0000269|PubMed:12679534}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}. |
