PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D05G2870
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 462aa    MW: 51880.1 Da    PI: 8.5682
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D05G2870genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1217.4e-07440462729
                  HHCHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   7 errkqkNReAArrsRqRKkaeie 29 
                  +rr+++NR+ Ar+sR+RKka+++
  Gh_D05G2870 440 QRRLAQNRVVARKSRLRKKAYVQ 462
                  89*******************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5029722.0121206IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.204.1E-305272IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.14E-306229IPR020683Ankyrin repeat-containing domain
CDDcd002043.47E-118126No hitNo description
SMARTSM002481303665IPR002110Ankyrin repeat
PfamPF136371.1E-53991No hitNo description
CDDcd002042.07E-1968205No hitNo description
SMARTSM002484.87099IPR002110Ankyrin repeat
PROSITE profilePS500888.7367091IPR002110Ankyrin repeat
SMARTSM00248480104134IPR002110Ankyrin repeat
SMARTSM002481100139168IPR002110Ankyrin repeat
PfamPF136377.6E-8142205No hitNo description
SMARTSM002480.0033184214IPR002110Ankyrin repeat
PROSITE profilePS500889.644184206IPR002110Ankyrin repeat
PfamPF139621.3E-11265353IPR026961PGG domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MDERLKRAAE TGNIDALYSF IHHDASVFKR IDEMEFVDTP LHVAAVEGNT GFAMEMMNLK  60
PSFARKLNQD GFSPLHLALL TGKPEMVIDF LSVDKDLIRV KGKGGFTVLH HVALDENYAH  120
LLRRFLNFCP DCIFDLTVER QTALHIAAVK NKFEAFKAML EWIQSAFEDD KCKRSKILNY  180
QDKDGNTVLH LAASINHPQM IKLLIECEEV DKNKINDHGF TAMDVLQSQT VADNMESVNI  240
LSSNPLTFQK LSSVKIFQEA IKEMRDETVG VLLIVFALVL TMTYQGVLSP PGSVFQGDTT  300
ASTSSNHREG KSVMKTSSFL IFYIPNGLAF IISWGITLFL LESVAKSIMS CLSRIYTIVF  360
IPNSSPKSLI FSPKNFPRIP NSPNQNPQIF PRPSAASQLI VPSVESPSTL LCSIVVDTPL  420
VHHHGSYSLK MKMFDAENIQ RRLAQNRVVA RKSRLRKKAY VQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016684569.10.0PREDICTED: ankyrin repeat domain-containing protein 6-like
TrEMBLA0A1U8J8P00.0A0A1U8J8P0_GOSHI; ankyrin repeat domain-containing protein 6-like
STRINGGorai.009G317200.10.0(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.24e-08TGACG motif-binding factor 4