PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D02G1209 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | Nin-like | ||||||||
Protein Properties | Length: 139aa MW: 15304.9 Da PI: 5.0868 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 25.1 | 3.5e-08 | 37 | 59 | 26 | 48 |
RWP-RK 26 gvclTvLKriCRqyGIkRWPhRk 48 gv ++vLK+iC ++G++RWPh k Gh_D02G1209 37 GVFTSVLKKICHENGLDRWPHCK 59 68899***************966 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02042 | 2.1E-6 | 37 | 59 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence Send to blast |
MLAVIAILIF KHGLGIPPNS LPSFSFSALI LSDVSQGVFT SVLKKICHEN GLDRWPHCKP 60 DAGLAAAILM QNLSRISMAA TAYSKGELEY AAYLSDQVTY LFDKMEECLG IVLLEALQNG 120 ATVLDLKKLE NLFYYIFDT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012459805.1 | 4e-68 | PREDICTED: uncharacterized protein LOC105780177 isoform X1 | ||||
Refseq | XP_012459806.1 | 4e-68 | PREDICTED: uncharacterized protein LOC105780177 isoform X1 | ||||
TrEMBL | A0A0D2V0L2 | 1e-66 | A0A0D2V0L2_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.005G133400.1 | 1e-80 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM36243 | 2 | 2 |