PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A12G0294
Common NameWRKY81
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 435aa    MW: 48364.7 Da    PI: 5.8255
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A12G0294genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.3e-30229288159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  Gh_A12G0294 229 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 288
                  58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-32214290IPR003657WRKY domain
SuperFamilySSF1182901.06E-27222290IPR003657WRKY domain
PROSITE profilePS5081128.988224290IPR003657WRKY domain
SMARTSM007743.2E-37229289IPR003657WRKY domain
PfamPF031063.2E-27230288IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MEMDLSLKID SQEKEEDMEE SMDSKMQVEE AEATHEDKEV TSMAAAGEVE DVDAPLELSL  60
QGNNKTHELS VLQLEMNRMK EENKVLRKVV EKTMQDYYDL QMKFAVIQKN DHKQDPPIFL  120
SLNGNGNGNS SQDQEPIQRN LKHGSSEGDH NDEENEEELG LSLRLQISSS QREREEEHNK  180
EGSEETPNVA SEQNKLQPTS LSAITSHAVS PPNRKARVSV RARCQTATMN DGCQWRKYGQ  240
KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC LEDMSILITT YEGTHNHPLP VGATAMASTA  300
SAAADSFMFL DSSNALSNGI PNLSQASLPY QNHPHLMKSH RNVMNFTDPS KGTILDLTNN  360
RHVNHHFPTA SSSSSHHPSP AFPWMPSRLS NGTSSRQWKS QEDKSLAENV TAIASDPKFR  420
VAVAAAITSL INKES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22216292176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6698300.0KF669830.1 Gossypium hirsutum WRKY transcription factor 81 (WRKY81) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016719407.10.0PREDICTED: probable WRKY transcription factor 9
SwissprotQ9C9F01e-81WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A2P5YDF30.0A0A2P5YDF3_GOSBA; Uncharacterized protein
STRINGGorai.008G041400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM67362741
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.15e-60WRKY DNA-binding protein 9
Publications ? help Back to Top
  1. Dou L, et al.
    Genome-wide analysis of the WRKY gene family in cotton.
    Mol. Genet. Genomics, 2014. 289(6): p. 1103-21
    [PMID:24942461]