PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_A11G0997 | ||||||||
Common Name | WRKY31 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | WRKY | ||||||||
Protein Properties | Length: 248aa MW: 27797.4 Da PI: 4.887 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.4 | 1.9e-30 | 54 | 112 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+ Gh_A11G0997 54 SDLWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCKTDASMLIITYTSSHNHP 112 699***********************9988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.4E-31 | 48 | 114 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.974 | 48 | 114 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.8E-26 | 51 | 114 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.1E-36 | 53 | 113 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.7E-25 | 55 | 112 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence Send to blast |
MDDSVSPKLA SDDSELNPTD TQSSKRSRKV VEKIVVTVKV GENGGKLKSE GPPSDLWSWR 60 KYGQKPIKGS PYPRGYYRCS TSKGCSAKKQ VERCKTDASM LIITYTSSHN HPGPDLHCAD 120 LKQSPKEPQT THSDDDKPPT TTLKQLPEVS EKEPEEVKKE QNKTSSTDED ASEEQHFHYL 180 QSPLSFPQNN IISQEDPFNG NLEKTHDTLG FLLDEEPLSC LHITTSSIPK SEENDFFDEL 240 EELPISXN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 1e-22 | 54 | 114 | 17 | 79 | Disease resistance protein RRS1 |
5w3x_D | 1e-22 | 54 | 114 | 17 | 79 | Disease resistance protein RRS1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.6771 | 0.0 | boll| leaf| ovule |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 31072954 | 0.0 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ825873 | 0.0 | KJ825873.1 Gossypium hirsutum WRKY protein 31 (WRKY31) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016710916.1 | 1e-180 | PREDICTED: probable WRKY transcription factor 35 isoform X2 | ||||
TrEMBL | A0A1U8L8I8 | 1e-179 | A0A1U8L8I8_GOSHI; probable WRKY transcription factor 35 isoform X2 | ||||
STRING | Gorai.007G122300.1 | 1e-164 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM15371 | 11 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 1e-34 | WRKY DNA-binding protein 35 |