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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gh_A10G0849 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GRAS |
Protein Properties |
Length: 517aa MW: 58387.5 Da PI: 6.0298 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gh_A10G0849 | genome | NAU-NBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 298.3 | 2e-91 | 160 | 516 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99
e L+++A++++++dl+laq +L rl+++ +sp+g+p+qR+ +yf+eAL++ ++ s p++ +s+++ ++++ a+k fs + Pi+ f h+t+N
Gh_A10G0849 160 EELIRAANCFDTHDLQLAQVILDRLHQRlRSPSGKPLQRASFYFKEALQSLFTG--S--TWPNPVRLSSWSEIVQTIEAYKSFSGINPIPMFNHFTTN 253
689************************99************************9..2..2234777788888************************** PP
GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
qa+lea++g+ +HiiDfdi+ G+Q+++L++++a+R+ ++ +RiT+v+++e e++ ++++L++fA++l+++f++++++ ++e++++++++
Gh_A10G0849 254 QALLEALDGSaPLIHIIDFDIGFGGQYASLMREMAERNdHSRKFIRITAVVPEE--YGFETRLIEDNLNQFAQALRLRFQIEFVLLPTFETMSFKAFK 349
**********7889************************556669********66..99999**********************9999*********** PP
GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklpreseerikvErell 290
+ +gE++a+ l+ +++r l +++ +++++ ++++sP vvv+v++e ++ +++sF + f+++le+y+++f+sl+a e+ +k+E ll
Gh_A10G0849 350 FINGEKTAILLSPSIFRCL--GLQV----TAFVSDLRRISPSVVVFVDSEvwMESgTTTSFRKNFVNCLEFYAMMFESLDAA---GGEWVRKIETLLL 438
******************9..3333....56*******************665666778********************998...689********** PP
GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++i ++v ++ + + Wre + eaG+++v+ls+ a qa++ll+kv+++g++v +++++lvl+W++ +L ++S+Wr
Gh_A10G0849 439 RPRIFSAVEAAART------AAPAWREVFCEAGMRAVRLSQLADFQAESLLQKVQVRGFHVAKRQAELVLCWHKTALSATSVWR 516
********998887......7899***********************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 517 aa
Download sequence Send
to blast |
MRVPVCSPQA NHYPIPKPDI NNNNITITAG NITFLNSSVP ASSCEPTLEL DLRRSPSSAV 60 TENPVLNPAD NSNCFSVSGP HQQQAGLEWD EHVLRNMDWD AILKDFGLDD ESVPATKTIP 120 PQVINPRLDN HIQNVPELTS CELTHHPLHS DFNLYESYSE ELIRAANCFD THDLQLAQVI 180 LDRLHQRLRS PSGKPLQRAS FYFKEALQSL FTGSTWPNPV RLSSWSEIVQ TIEAYKSFSG 240 INPIPMFNHF TTNQALLEAL DGSAPLIHII DFDIGFGGQY ASLMREMAER NDHSRKFIRI 300 TAVVPEEYGF ETRLIEDNLN QFAQALRLRF QIEFVLLPTF ETMSFKAFKF INGEKTAILL 360 SPSIFRCLGL QVTAFVSDLR RISPSVVVFV DSEVWMESGT TTSFRKNFVN CLEFYAMMFE 420 SLDAAGGEWV RKIETLLLRP RIFSAVEAAA RTAAPAWREV FCEAGMRAVR LSQLADFQAE 480 SLLQKVQVRG FHVAKRQAEL VLCWHKTALS ATSVWRC
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |