PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_A05G2270

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

bHLH

Protein Properties

Length: 1001aa MW: 113945 Da PI: 4.756

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_A05G2270	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51774	44.542	11	91	IPR011684	Protein Networked (NET), actin-binding (NAB) domain
Pfam	PF07765	1.9E-34	12	85	IPR011684	Protein Networked (NET), actin-binding (NAB) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005886	Cellular Component	plasma membrane
GO:0003779	Molecular Function	actin binding

Sequence ? help Back to Top
Protein Sequence Length: 1001 aa Download sequence Send to blast
MMLQKVASNA YSWWWASHIR TKQSKWLEQN LHDVEEKVSN MLEIIDDDGD SFAQRANMYY 60 RKRPELLAIV EDTYRAYRAL AERFDYLSRD LQSANRTIAT VFPDQVPYSL HDEDDENSCL 120 VLTSSSLNKS KSLKPGSRVP SPKTDFRSQS MLLLRKGQLK KAFSSAQAAS SLNSGLSKEE 180 ALEEINKLQK EILEMQTERE LVKNSYEQGY KKLCEIENDI TEKQKRIYNL QDEYDIRSAI 240 DDNEARILMA NRVLKTCQES LVKLQETHEQ STEEGRVESK RIKKVNEAFE ALRKKFNSPQ 300 TDQQKQKKAS SARDVDNMVY EFNSAEKGRE YMELLQKEIE EKLELDPSSS LTMSQLADKI 360 DDLVQRVVNM ETAVFSENAS VKRLKSDADE LQEHVKSLEE DEEVLAEGSD SMEQRISVLE 420 GELSGVKELL KTIIEQNNSL KAHFTAASCD INHLSVNLHA VKMDEEVENA ELSEEGKPKV 480 DAKPNRKTKE YCIELVPRDS PALGTESEME EKDEDVSAEE MNTVNSESRN KFDVDSTKDS 540 EVINEFKDEN KSLSKTASCT TDTENPKVET EEEELPNWRK LYLSGLDERE KALLDEYSSV 600 LHNYKDVRKK LKEVDQKNRD SFYELASQIK ELKSALAARD EEIQSSRQHL SFINENKDGN 660 LSEYEASHAI MSPESTLTES IPASPVAAGE GKGESIENPG EGKRKSTAKA GEGKGESIEN 720 PGEGEGETIE NPGEGEGESI KKAGEKSKGD AMQPRSLTRS RSILTVEDKI RSDIDELLEE 780 NLAFWLRFST CFHQIQKYQN SVKDLKAELS KMRERKKQEA GGKEEPVGSE ARPIYAHFRE 840 IKTELTLWLE NNAVLKDEVQ CRYSSLCKIQ EEIERISNVS GHEGEPQFNG YQAAKFQGEI 900 INMKQENNKV SNELNAGFDC VKQLKEEVEN LMVELDKEIE AATSKNQQSV SRSRSRIPLR 960 SFLFGIKLKN KWQQKGPSMF ACGHPTLQRQ YSYLTDPTDP S

Sequence ? help Back to Top

Protein Sequence Length: 1001 aa Download sequence Send to blast

MMLQKVASNA YSWWWASHIR TKQSKWLEQN LHDVEEKVSN MLEIIDDDGD SFAQRANMYY  60
RKRPELLAIV EDTYRAYRAL AERFDYLSRD LQSANRTIAT VFPDQVPYSL HDEDDENSCL  120
VLTSSSLNKS KSLKPGSRVP SPKTDFRSQS MLLLRKGQLK KAFSSAQAAS SLNSGLSKEE  180
ALEEINKLQK EILEMQTERE LVKNSYEQGY KKLCEIENDI TEKQKRIYNL QDEYDIRSAI  240
DDNEARILMA NRVLKTCQES LVKLQETHEQ STEEGRVESK RIKKVNEAFE ALRKKFNSPQ  300
TDQQKQKKAS SARDVDNMVY EFNSAEKGRE YMELLQKEIE EKLELDPSSS LTMSQLADKI  360
DDLVQRVVNM ETAVFSENAS VKRLKSDADE LQEHVKSLEE DEEVLAEGSD SMEQRISVLE  420
GELSGVKELL KTIIEQNNSL KAHFTAASCD INHLSVNLHA VKMDEEVENA ELSEEGKPKV  480
DAKPNRKTKE YCIELVPRDS PALGTESEME EKDEDVSAEE MNTVNSESRN KFDVDSTKDS  540
EVINEFKDEN KSLSKTASCT TDTENPKVET EEEELPNWRK LYLSGLDERE KALLDEYSSV  600
LHNYKDVRKK LKEVDQKNRD SFYELASQIK ELKSALAARD EEIQSSRQHL SFINENKDGN  660
LSEYEASHAI MSPESTLTES IPASPVAAGE GKGESIENPG EGKRKSTAKA GEGKGESIEN  720
PGEGEGETIE NPGEGEGESI KKAGEKSKGD AMQPRSLTRS RSILTVEDKI RSDIDELLEE  780
NLAFWLRFST CFHQIQKYQN SVKDLKAELS KMRERKKQEA GGKEEPVGSE ARPIYAHFRE  840
IKTELTLWLE NNAVLKDEVQ CRYSSLCKIQ EEIERISNVS GHEGEPQFNG YQAAKFQGEI  900
INMKQENNKV SNELNAGFDC VKQLKEEVEN LMVELDKEIE AATSKNQQSV SRSRSRIPLR  960
SFLFGIKLKN KWQQKGPSMF ACGHPTLQRQ YSYLTDPTDP S

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016748556.1	0.0	PREDICTED: protein NETWORKED 2A-like
TrEMBL	A0A1U8PBI8	0.0	A0A1U8PBI8_GOSHI; protein NETWORKED 2A-like
STRING	Gorai.009G279300.1	0.0	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM4169	3	4