PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_A05G2091 | ||||||||
Common Name | WRKY77 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | WRKY | ||||||||
Protein Properties | Length: 171aa MW: 19849.5 Da PI: 8.1325 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.7 | 1.8e-31 | 95 | 153 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K++k++++pr+YYrC+++gC+vkk+ver++ed+++v++tYeg+Hnhe Gh_A05G2091 95 MDDGYKWRKYGKKKIKNNPNPRHYYRCSMEGCKVKKRVEREREDEQFVITTYEGKHNHE 153 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.0E-33 | 83 | 155 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-27 | 89 | 155 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.009 | 90 | 155 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.3E-34 | 95 | 154 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.5E-25 | 96 | 153 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence Send to blast |
MELNRDDHLD FEDFLVLPHL ETHKEPAAAC SSLKAKPSIT LSPVNGSCRD LPSNTLCVDY 60 MLQQNYEGYV MERMEGEAAG KVKVAFRTRS CLEIMDDGYK WRKYGKKKIK NNPNPRHYYR 120 CSMEGCKVKK RVEREREDEQ FVITTYEGKH NHENPAAATS LPAHQNLLRY H |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 9e-26 | 85 | 156 | 7 | 78 | Probable WRKY transcription factor 4 |
2ayd_A | 1e-25 | 83 | 157 | 2 | 76 | WRKY transcription factor 1 |
2lex_A | 9e-26 | 85 | 156 | 7 | 78 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF669816 | 0.0 | KF669816.1 Gossypium hirsutum WRKY transcription factor 77 (WRKY77) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017637009.1 | 1e-128 | PREDICTED: probable WRKY transcription factor 71 | ||||
TrEMBL | A0A068LEP7 | 1e-125 | A0A068LEP7_GOSHI; WRKY transcription factor 77 | ||||
STRING | Gorai.009G259600.1 | 1e-119 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM22097 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 2e-13 | WRKY DNA-binding protein 51 |
Publications ? help Back to Top | |||
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