 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gh_A05G1175 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
ERF |
| Protein Properties |
Length: 356aa MW: 39700.2 Da PI: 4.3033 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A05G1175 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 25.9 | 2.5e-08 | 116 | 142 | 29 | 55 |
AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55
r++lg+f taeeAa+a++ +++++g
Gh_A05G1175 116 LRVWLGTFNTAEEAARAYDSEARRIRG 142
59**********************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MCGGAIISDF IAPVRSRRMT ADYLWPDLRK SQSKKASSNR YSKPAIDFTD NFEADFQDFK 60
DDESDIEDYD VDDVLADARP FAFSATKKAS STFSYDLLFS STITCIIRFM HVCISLRVWL 120
GTFNTAEEAA RAYDSEARRI RGKKAKVNFP DEMPRTSPKR VIKTNDEKPL PMSNLSPVEP 180
NIYQNFNCLN KPEQVFYDTV GFVEEKAPMD PFAYVDTVGL KPFGQSDNTP LYFSSDRGST 240
SFDCSDFGWG EHGAKTPEIS SALEATMEGD DFLEDANPKK KLKPSSENVM SIEDNSAKSL 300
SDELLALDDQ MKYPFLEGNW DATLDALLNG DASQYGGALT DLWSFGDFPA VAGGLF
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ372577 | 1e-125 | DQ372577.1 Gossypium hirsutum isolate vdrg18 disease resistance-related mRNA sequence. |
