PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A04G0869
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family ERF
Protein Properties Length: 326aa    MW: 36889 Da    PI: 7.8666
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A04G0869genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-20154203255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a++k++g
  Gh_A04G0869 154 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAALAYDKAALKFKG 203
                  7********.**********94....45************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.7E-33153212IPR001471AP2/ERF domain
SMARTSM003801.2E-37154217IPR001471AP2/ERF domain
CDDcd000188.25E-35154212No hitNo description
PfamPF008471.2E-13154203IPR001471AP2/ERF domain
PROSITE profilePS5103224.895154211IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-22154212IPR016177DNA-binding domain
PRINTSPR003671.1E-11155166IPR001471AP2/ERF domain
PRINTSPR003671.1E-11177193IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MFPPTSPNYI FYPNKHLPNP KLDPIHPPYL SLHIDYPWHL AIYQSILCIS QLLSLYHSFK  60
IFVKNKVDHR RHGKRPLPPE TSAEKRQGPD EFGTASWPES ADTSAIVTAL TQVIGSDDQQ  120
LIGFPQSSAP SSAQPHPGPP QLAVQDQENT RKRHYRGVRQ RPWGKWAAEI RDPKKAARVW  180
LGTFDTAEDA ALAYDKAALK FKGTKAKLNF PERAQWNMEA PSPGDSSTMR PEQNPTPLAP  240
PSSWSQDSYP HLLQYAQLLS SSNDADISYY TSNLFNEQQP LSPQFPSMSA SSQHYQQDLT  300
RFSTEYQSSD YQGQYGKDFD PSNRSQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-26151213265ATERF1
3gcc_A2e-26151213265ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017614034.10.0PREDICTED: ethylene-responsive transcription factor ERF114
TrEMBLA0A2P5YW340.0A0A2P5YW34_GOSBA; Uncharacterized protein
STRINGGorai.012G125700.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.12e-38related to AP2 6l