PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_A04G0814 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | BES1 | ||||||||
Protein Properties | Length: 178aa MW: 19926.6 Da PI: 9.2885 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 119.1 | 6.1e-37 | 39 | 120 | 4 | 85 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 r pt+ Er +nk+RER+RRa+a ki+aGL+++Gny+lpkraD n+ lkA c+eAGw ve+DGt y+k s+ + + +++ ss Gh_A04G0814 39 YRFPTEDERLKNKQRERKRRAVAHKIFAGLKEHGNYNLPKRADSNDLLKAVCEEAGWHVEADGTIYKKKSRATMAVSMVHSS 120 589****************************************************************999999444444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.8E-33 | 40 | 120 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence Send to blast |
MAGEKENKNT STLRGCIKKS KGPWVVHRTT KEGGRVTRYR FPTEDERLKN KQRERKRRAV 60 AHKIFAGLKE HGNYNLPKRA DSNDLLKAVC EEAGWHVEAD GTIYKKKSRA TMAVSMVHSS 120 CQFVEDIGQS RDEDYCICND DGNVAAPTGT LLSLGLGRSH ECHDINLMLS LSISSSFT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 8e-13 | 59 | 106 | 391 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 8e-13 | 59 | 106 | 391 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 8e-13 | 59 | 106 | 391 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 8e-13 | 59 | 106 | 391 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX622915 | 6e-34 | JX622915.1 Gossypium hirsutum clone NBRI_GE69860 microsatellite sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016752338.1 | 1e-132 | PREDICTED: uncharacterized protein LOC107960509 | ||||
TrEMBL | A0A1U8PPS3 | 1e-131 | A0A1U8PPS3_GOSHI; uncharacterized protein LOC107960509 | ||||
STRING | Gorai.012G118900.1 | 1e-118 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM19597 | 6 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45300.1 | 7e-18 | beta-amylase 2 |