PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A04G0695
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bHLH
Protein Properties Length: 111aa    MW: 12624.5 Da    PI: 9.6297
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A04G0695genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-107097330
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
          HLH  3 rahnerErrRRdriNsafeeLrellPka 30
                 ++h+++ErrRR+riN  +++Lr+llP +
  Gh_A04G0695 70 KSHSKAERRRRERINAHLDTLRTLLPYR 97
                 58************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.89667111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.74E-76998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-87097IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-87097IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.58E-77095No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MAAYYFNDNI FLSGNCYSGF LDPFSRDLGP CNGISQSLVL DNEKSELVVK SPVKVGKKSV  60
AEEKVIAALK SHSKAERRRR ERINAHLDTL RTLLPYRKKV VQVEYKVEYE G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17580ERRRRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.126451e-139boll| ovule
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017635773.17e-61PREDICTED: transcription factor AIG1-like isoform X1
RefseqXP_017635823.17e-61PREDICTED: transcription factor AIG1-like isoform X2
TrEMBLA0A2P5WRX84e-75A0A2P5WRX8_GOSBA; Uncharacterized protein
STRINGGorai.011G034000.11e-54(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2468424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.13e-07bHLH family protein