PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_A02G1397 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | Dof | ||||||||
Protein Properties | Length: 310aa MW: 33911.6 Da PI: 9.5212 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 127.1 | 5.2e-40 | 34 | 94 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk++ Gh_A02G1397 34 QDQPLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKMK 94 68999*****************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-26 | 29 | 92 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.2E-33 | 35 | 92 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.432 | 38 | 92 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 40 | 76 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence Send to blast |
MMSLDNPPAK PGGGDSKEET QKGGSRKTSS TRTQDQPLKC PRCDSPNTKF CYYNNYSLTQ 60 PRHFCKTCRR YWTKGGALRN VPIGGGCRKN KKMKSSSRLS SGDPKGSTSE MGGGLKFFHD 120 ISPAMDFQLG GLSFQSPATG IYNQFASFGV SNNNSSVGSP LMGFSNYPQP LPSVTTNLTG 180 AIQDMGSSLN VNSNLASSIE SLSSINQDLH WKLQQQRLAT MLFDGGEQNQ AQQQKPLPIL 240 FQNLEVSKPE NVSTMGNPRK SNETAKEWFF GNSYATPTTS SNGNDNNNTS NWNGVQVQPW 300 NDLNQYTTLP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017622511.1 | 0.0 | PREDICTED: dof zinc finger protein DOF5.7-like | ||||
TrEMBL | A0A2P5YUE4 | 0.0 | A0A2P5YUE4_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.003G036800.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4950 | 28 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65590.1 | 2e-52 | Dof family protein |