PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_A01G0529

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

NZZ/SPL

Protein Properties

Length: 325aa MW: 35116.5 Da PI: 8.646

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_A01G0529	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	56.2	1.1e-17	31	323	39	314
NOZZLE 39 tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkkl.vvatvgdtssvaaisntatrlpvpvdrgvvlqgfps.................. 117 k +grkp k qk k rgmgva+ler + e + ++ g + a+ + pv +gv g ps Gh_A01G0529 31 VKSNKGRKPSGKGPYQK--KQPQRGMGVAQLERLRKMSETRTPtTINQFGCEA------MGASNV--PVLHGVANYGVPSmminggsgglwgwgadtd 118 45669***9988764..4457*******9888877652333334333......344444..5899*****999999999999988888 PP NOZZLE 118 ...........slgs..srilcggvgsgqvmidpvispwgfvetsatthelssisnpqmynassnnrcdtcfkkkrldgdqnnvvrsngggfskytmi 202 +g+ s++l+g g qv ++ ve+s elss+++ q + ++ cd cfkkkr + ++ + ngg f + Gh_A01G0529 119 glmmqrvvgngGFGGfnSQVLVGNPGNVQV----SCAAASVVEASK---ELSSMPKFQH--CKPEH-CDLCFKKKRCNMEN---GKFNGGLFNQLGQT 203 544444443333333334444444444433....356666777776...99987654..44555.********9988...789**99876 PP NOZZLE 203 .pppmngydeyllqsdhhqrsqgfl...ydqriaraasvsaasasinpyfneatnltgsreefgsvlegnprngsrgvkeyeffpgkydervs.k... 292 p + + l+++ q ++ + + r ar+a aa+ +n +ne+ + + + gn v eyeffpgk + ++ k Gh_A01G0529 204 fPNKGTDFHGWNLENN--QNTNEEMmkgFRARAARSAYAYAAAGQMN--INETVDVVAIHRK------GNSFGTGSYVMEYEFFPGKNGRNTAsKewe 291 3555555666666655..43333321124678888887777777766..6887777665544......44445556799*****987543312111 PP NOZZLE 293 ....vakvaslvg......dcspntidlslkl 314 + a +vg + +pn +dlslkl Gh_A01G0529 292 fpeeASSSAITVGgeasyaNNAPNCVDLSLKL 323 11112222223332221114568999999997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	5.6E-19	29	323	IPR014855	Plant transcription factor NOZZLE

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0048653	Biological Process	anther development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence Send to blast
MATSLTLLTP NTDNPTTKPM EDEAKPAMEF VKSNKGRKPS GKGPYQKKQP QRGMGVAQLE 60 RLRKMSETRT PTTINQFGCE AMGASNVPVL HGVANYGVPS MMINGGSGGL WGWGADTDGL 120 MMQRVVGNGG FGGFNSQVLV GNPGNVQVSC AAASVVEASK ELSSMPKFQH CKPEHCDLCF 180 KKKRCNMENG KFNGGLFNQL GQTFPNKGTD FHGWNLENNQ NTNEEMMKGF RARAARSAYA 240 YAAAGQMNIN ETVDVVAIHR KGNSFGTGSY VMEYEFFPGK NGRNTASKEW EFPEEASSSA 300 ITVGGEASYA NNAPNCVDLS LKLSY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016733178.1	0.0	PREDICTED: protein SPOROCYTELESS-like isoform X1
TrEMBL	A0A1U8N5Q2	0.0	A0A1U8N5Q2_GOSHI; protein SPOROCYTELESS-like isoform X1
TrEMBL	A0A2P5WHU3	0.0	A0A2P5WHU3_GOSBA; Uncharacterized protein
STRING	Gorai.002G077500.1	0.0	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM18639	6	7