PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS74595.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 438aa MW: 47793.1 Da PI: 6.4707

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS74595.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.6	4.3e-11	195	237	4	46
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k rr+++NReAAr+sR+RKka+i++Le ++L + ++Lk EPS74595.1 195 QKSLRRLAQNREAARKSRLRKKAYIQQLESSRQKLAQLEHELK 237 6889*************************98888888777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.8E-9	187	237	No hit	No description
SMART	SM00338	3.7E-6	192	267	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.53	194	238	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.8E-7	196	237	No hit	No description
CDD	cd14708	3.47E-21	196	248	No hit	No description
Pfam	PF00170	2.6E-8	196	237	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	199	214	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	9.1E-29	276	350	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence Send to blast
MHNYEATVTQ QHIPITNSDA YCHSHSPFYL RGGEDGGRTA GTHVADLGEL DDQSSQGNGF 60 HHHLDVLHVP NKSCGGNGVK PVLSSSLHLV GLGNSWGGST EMGSAMAGQL FLQKEGILGF 120 VGGGGGHGHG HGHGNGPLGN DNNWADSGVV ADHSGQTETS TDTDDKNQFL GAHNRRLIAA 180 AAYSPEPSKA SIEDQKSLRR LAQNREAARK SRLRKKAYIQ QLESSRQKLA QLEHELKRGR 240 HQSSLLPTSG CPTNGVAVNA FDLEYARWLE EQQRLIHDLR SALNSNVTTD GELQHFVDSV 300 MSHYENLFQL KRSAAKNDIF HILSGMWKSP AERCFIWLGG FRSSDILKIL GNQIEPLSEQ 360 QLVGICNLQQ SSQQAEDALT QGLEALQQSL MESLSSNAFG SSNSEYMEQM TIALSKLAAL 420 ENFLHQVNIY EISISILP

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence Send to blast

MHNYEATVTQ QHIPITNSDA YCHSHSPFYL RGGEDGGRTA GTHVADLGEL DDQSSQGNGF  60
HHHLDVLHVP NKSCGGNGVK PVLSSSLHLV GLGNSWGGST EMGSAMAGQL FLQKEGILGF  120
VGGGGGHGHG HGHGNGPLGN DNNWADSGVV ADHSGQTETS TDTDDKNQFL GAHNRRLIAA  180
AAYSPEPSKA SIEDQKSLRR LAQNREAARK SRLRKKAYIQ QLESSRQKLA QLEHELKRGR  240
HQSSLLPTSG CPTNGVAVNA FDLEYARWLE EQQRLIHDLR SALNSNVTTD GELQHFVDSV  300
MSHYENLFQL KRSAAKNDIF HILSGMWKSP AERCFIWLGG FRSSDILKIL GNQIEPLSEQ  360
QLVGICNLQQ SSQQAEDALT QGLEALQQSL MESLSSNAFG SSNSEYMEQM TIALSKLAAL  420
ENFLHQVNIY EISISILP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011077152.1	1e-140	transcription factor HBP-1b(c38)-like
Swissprot	Q41558	1e-102	HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBL	S8D589	0.0	S8D589_9LAMI; Uncharacterized protein
STRING	EOY02112	1e-120	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.2	1e-100	TGACG motif-binding factor 6

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]