PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS74590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 107aa MW: 12251.9 Da PI: 5.2614 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.2 | 9.2e-11 | 30 | 78 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah+ +Er RR++i +++ L++l+P + ++ Ka +L + ++Y++sLq EPS74590.1 30 AHSLAERVRREKISERMKILQSLVPGC---SKVVTGKAVMLDEIINYVQSLQ 78 8**************************...8888*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 5.1E-18 | 23 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.85E-9 | 24 | 82 | No hit | No description |
PROSITE profile | PS50888 | 15.447 | 26 | 77 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.5E-8 | 30 | 78 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-17 | 30 | 95 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.3E-11 | 32 | 83 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
QEDNEEEDEE EAPPKDYIHV RARRGQATDA HSLAERVRRE KISERMKILQ SLVPGCSKVV 60 TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT INQRVVMNTE TPVSKDV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012481609.1 | 1e-50 | PREDICTED: transcription factor bHLH62 | ||||
Refseq | XP_016714064.1 | 1e-50 | PREDICTED: transcription factor bHLH62-like | ||||
Refseq | XP_016722857.1 | 1e-50 | PREDICTED: transcription factor bHLH62-like | ||||
Swissprot | Q9SRT2 | 3e-47 | BH062_ARATH; Transcription factor bHLH62 | ||||
TrEMBL | S8D585 | 3e-72 | S8D585_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Gorai.005G022400.1 | 1e-49 | (Gossypium raimondii) | ||||
STRING | Solyc09g097870.2.1 | 7e-50 | (Solanum lycopersicum) | ||||
STRING | PGSC0003DMT400042791 | 9e-50 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4116 | 23 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07340.1 | 6e-49 | bHLH family protein |
Publications ? help Back to Top | |||
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