PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS74246.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | ARR-B | ||||||||
Protein Properties | Length: 204aa MW: 23447.8 Da PI: 8.5063 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 70.4 | 2.9e-22 | 143 | 192 | 4 | 54 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt eLH++F+ av+qL G+ + Pk+ilelm+v+gLt+ +v+SHLQk R EPS74246.1 143 TEWTAELHDKFMAAVQQL-GEGRCFPKEILELMNVPGLTRMQVASHLQKCR 192 58****************.9*****************************98 PP | |||||||
2 | Response_reg | 30.6 | 1.7e-11 | 4 | 85 | 29 | 109 |
ESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT.HHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 29 addgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge.eedalealkaGakdflsKpfdpeelvk 109 ++ +++a++ l++ + ++li+ i+ p+ + l+l+++ ++ e +pii+ t+ +e + + +a+++Ga +l+Kp + e + + EPS74246.1 4 VSLARDAIDVLRAGKtrFHLIIANINSPDGQFLQLVQQAATTE--TPIILTTSWNEdPLHVRQAIELGAFMYLAKPLKSETMAN 85 55567788888766667**************999999998877..*******8888577788999***********99988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50110 | 18.725 | 1 | 91 | IPR001789 | Signal transduction response regulator, receiver domain |
Gene3D | G3DSA:3.40.50.2300 | 1.5E-13 | 1 | 122 | No hit | No description |
CDD | cd00156 | 8.55E-8 | 1 | 91 | No hit | No description |
Pfam | PF00072 | 3.0E-6 | 4 | 85 | IPR001789 | Signal transduction response regulator, receiver domain |
SuperFamily | SSF52172 | 3.56E-12 | 7 | 94 | IPR011006 | CheY-like superfamily |
PROSITE profile | PS51294 | 11.589 | 135 | 196 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 9.41E-17 | 138 | 192 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.0E-22 | 139 | 193 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.5E-20 | 143 | 193 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.6E-8 | 144 | 191 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
VEQVSLARDA IDVLRAGKTR FHLIIANINS PDGQFLQLVQ QAATTETPII LTTSWNEDPL 60 HVRQAIELGA FMYLAKPLKS ETMANMWQHL LREDLRRKRD AEIFAKSADD SFGGIEKERR 120 RRLKREGDDV AAPAKEVKRK ECTEWTAELH DKFMAAVQQL GEGRCFPKEI LELMNVPGLT 180 RMQVASHLQK CRNDNWRSPE ERRA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 123 | RKRDAEIFAKSADDSFGGIEKERRRRLK |
2 | 118 | 125 | RRRRLKRE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011079700.1 | 6e-60 | two-component response regulator ARR14-like | ||||
TrEMBL | S8D9N5 | 1e-150 | S8D9N5_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009798262.1 | 9e-52 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA813 | 23 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-28 | response regulator 12 |
Publications ? help Back to Top | |||
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