PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS74111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | ERF | ||||||||
Protein Properties | Length: 84aa MW: 9217.64 Da PI: 10.6607 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.7e-17 | 1 | 48 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a ++ + EPS74111.1 1 YRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATAEMAARAHDVAERAVK 48 9****998.**********854...6*******************9988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 5.6E-11 | 1 | 47 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.26 | 1 | 57 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.41E-28 | 1 | 58 | No hit | No description |
SMART | SM00380 | 1.9E-33 | 1 | 63 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.75E-21 | 1 | 57 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 3.5E-11 | 1 | 12 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 9.5E-32 | 1 | 58 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-11 | 23 | 39 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence Send to blast |
YRGVRMRAWG KWVSEIREPK KKSRIWLGTF ATAEMAARAH DVAERAVKGS SAVLNFPEIS 60 DMLPRPATCS AGDVRAAANE AALM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 6e-18 | 1 | 62 | 15 | 77 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011078266.1 | 1e-43 | ethylene-responsive transcription factor TINY | ||||
Swissprot | Q9M080 | 3e-42 | ERF43_ARATH; Ethylene-responsive transcription factor ERF043 | ||||
TrEMBL | S8D9E3 | 9e-54 | S8D9E3_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.J01109.1.p | 3e-42 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32800.1 | 1e-44 | ERF family protein |
Publications ? help Back to Top | |||
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