PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS73634.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family HD-ZIP
Protein Properties Length: 140aa    MW: 16227.5 Da    PI: 10.1018
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS73634.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox597.6e-191264557
                SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                + ++++ql++Le+ F+  +++  e++  LAk lgL+ rq+ vWFqNrRa++k+
  EPS73634.1 12 RGLSSDQLRTLERNFQLGKKLEPERKMYLAKILGLPPRQIAVWFQNRRARWKN 64
                46799**********************************************95 PP

2HD-ZIP_I/II123.11.3e-39999191
  HD-ZIP_I/II  1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
                 ekkr ls++q+++LE++F+  +kLeperK+ la+ Lgl prq+avWFqnrRAR+k+kqlEkdy+ Lk++y+ + +en++L++++++L++++
   EPS73634.1  9 EKKRGLSSDQLRTLERNFQLGKKLEPERKMYLAKILGLPPRQIAVWFQNRRARWKNKQLEKDYDLLKAQYEGIIAENDALHTQNQKLQAKI 99
                 69**************************************************************************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.941565IPR001356Homeobox domain
SMARTSM003896.5E-20869IPR001356Homeobox domain
SuperFamilySSF466898.98E-20974IPR009057Homeodomain-like
CDDcd000868.25E-151066No hitNo description
PfamPF000462.9E-161264IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.608.2E-211472IPR009057Homeodomain-like
PROSITE patternPS0002704063IPR017970Homeobox, conserved site
PfamPF021833.6E-1265104IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
EDEFSDDGEK KRGLSSDQLR TLERNFQLGK KLEPERKMYL AKILGLPPRQ IAVWFQNRRA  60
RWKNKQLEKD YDLLKAQYEG IIAENDALHT QNQKLQAKIL AMKRREKTES SINLNNKASC  120
SSNMRREEVV EGGLSLAPPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15765RRARWKNKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017626534.12e-52PREDICTED: homeobox-leucine zipper protein ATHB-13-like
SwissprotQ8LC032e-49ATB13_ARATH; Homeobox-leucine zipper protein ATHB-13
TrEMBLS8D1H67e-98S8D1H6_9LAMI; Uncharacterized protein (Fragment)
STRINGGorai.005G139600.11e-51(Gossypium raimondii)
STRINGGorai.013G083600.11e-51(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20412363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-51HD-ZIP family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Ribone PA,Capella M,Chan RL
    Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
    J. Exp. Bot., 2015. 66(19): p. 5929-43
    [PMID:26136262]
  4. Wang X, et al.
    Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
    Sci China Life Sci, 2018. 61(1): p. 79-87
    [PMID:28887625]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]