PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS73412.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | ERF | ||||||||
Protein Properties | Length: 276aa MW: 29591.9 Da PI: 8.4169 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.3 | 2.9e-21 | 149 | 199 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g+ EPS73412.1 149 KYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFDTAEAAARAYDEAALRFRGN 199 8********.**********93....36*************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.0E-33 | 148 | 208 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.89E-23 | 149 | 208 | No hit | No description |
PROSITE profile | PS51032 | 25.857 | 149 | 206 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.53E-23 | 149 | 208 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.7E-15 | 149 | 198 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.7E-38 | 149 | 212 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.7E-12 | 150 | 161 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.7E-12 | 172 | 188 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence Send to blast |
MCLFKVANRG NNRKEEDGRV PATPIPGGGG GAATSFDGQS ASVTVDNTDV GFPYQLQQEQ 60 PDYLLSAVVS PPLLSGPGQS REMSAIVTAL RNVVSGDDST STGLFPEQKR RRFQEDGVVA 120 PMGFSSDMSV GPSTATASVD PPGGETQRKY RGVRQRPWGK WAAEIRDPQK AARVWLGTFD 180 TAEAAARAYD EAALRFRGNR AKLNFPESVR ALPPQQMQSS SVGVGEYSRL VQSQSPSLPP 240 VAPPPYRMMF SSGQTINFQS QPQPDGDNPP PSNPPP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 3e-23 | 148 | 209 | 4 | 66 | ATERF1 |
3gcc_A | 3e-23 | 148 | 209 | 4 | 66 | ATERF1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011101230.1 | 2e-50 | ethylene-responsive transcription factor ABR1-like | ||||
TrEMBL | S8ELB6 | 0.0 | S8ELB6_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4322 | 21 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 2e-23 | ethylene response factor 110 |
Publications ? help Back to Top | |||
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