PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS73235.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | ERF | ||||||||
Protein Properties | Length: 135aa MW: 15359.3 Da PI: 8.6775 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 70 | 120 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp++ g +r++lg+++ta eAaka+++a+ kl+g EPS73235.1 70 RYRGVRQRP-WGKFAAEIRDPKKKG--TRVWLGTYDTAVEAAKAYDRAAFKLRG 120 7********.**********96643..*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.28E-28 | 70 | 129 | No hit | No description |
SuperFamily | SSF54171 | 4.84E-23 | 70 | 130 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 4.9E-32 | 70 | 129 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.4E-38 | 70 | 134 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.907 | 70 | 128 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.1E-14 | 70 | 120 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.6E-11 | 71 | 82 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.6E-11 | 94 | 110 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MASPDESSAL EIIRQHLLDY DDRSFAEAYS LPPHCGDLHL AISRIDGEGE EPAVRREKRR 60 AAVVEEYSRR YRGVRQRPWG KFAAEIRDPK KKGTRVWLGT YDTAVEAAKA YDRAAFKLRG 120 CKAIVNFPHE IDPSS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 3e-28 | 68 | 132 | 3 | 67 | ATERF1 |
3gcc_A | 3e-28 | 68 | 132 | 3 | 67 | ATERF1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022034941.1 | 1e-39 | ethylene-responsive transcription factor 5-like | ||||
TrEMBL | S8D1G0 | 4e-94 | S8D1G0_9LAMI; Uncharacterized protein | ||||
STRING | Gorai.001G051200.1 | 2e-35 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA963 | 23 | 89 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 5e-33 | ERF family protein |
Publications ? help Back to Top | |||
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