PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS73069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | ERF | ||||||||
Protein Properties | Length: 293aa MW: 32382.2 Da PI: 8.7482 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.7e-19 | 85 | 136 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 + y+GVr++ +g+WvAeIr+p + +r +lg+fgta eAa ++aa+k+++g+ EPS73069.1 85 CNYRGVRQRT-WGKWVAEIREPH----KgRRLWLGTFGTALEAALSYDAAAKAMYGH 136 56*****999.**********72....35*************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.1E-14 | 85 | 136 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.54E-30 | 85 | 144 | No hit | No description |
PROSITE profile | PS51032 | 21.311 | 86 | 143 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.2E-29 | 86 | 144 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.9E-34 | 86 | 149 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.31E-20 | 86 | 143 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 6.6E-9 | 87 | 98 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.6E-9 | 109 | 125 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010286 | Biological Process | heat acclimation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
RDMSMVVLNQ DLNLRYEPMD FSNKRKPKSR RSGTNSVAET LAKWKDYNSR LETPLKESKP 60 IVKAPAKGSK KGCMKGKGGP ENSRCNYRGV RQRTWGKWVA EIREPHKGRR LWLGTFGTAL 120 EAALSYDAAA KAMYGHCARL NFPEYSSTKG ESSSRLTSSL SDSIGSSVSE ASHHGVSHRV 180 KTEADGEGFD FRHLETAPIL RVVKEEAKND GAKADEMFNV DELLAALDST PRNLPSAGDV 240 PPQNSAASSP SRGGPSNQQP HEYGLDFLKP GRQEDYNSML LDMFLDLDED MAL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 4e-16 | 86 | 143 | 5 | 63 | ATERF1 |
3gcc_A | 4e-16 | 86 | 143 | 5 | 63 | ATERF1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00302 | DAP | Transfer from AT2G40340 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | - | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858842.1 | 6e-77 | PREDICTED: dehydration-responsive element-binding protein 2A-like | ||||
TrEMBL | S8CZY0 | 0.0 | S8CZY0_9LAMI; Ethylene response factor 3 (Fragment) | ||||
STRING | Migut.F00629.1.p | 2e-76 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3701 | 24 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 4e-33 | DRE-binding protein 2A |
Publications ? help Back to Top | |||
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