PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS73069.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 293aa    MW: 32382.2 Da    PI: 8.7482
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS73069.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-1985136156
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 + y+GVr++  +g+WvAeIr+p     + +r +lg+fgta eAa  ++aa+k+++g+
  EPS73069.1  85 CNYRGVRQRT-WGKWVAEIREPH----KgRRLWLGTFGTALEAALSYDAAAKAMYGH 136
                 56*****999.**********72....35*************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.1E-1485136IPR001471AP2/ERF domain
CDDcd000181.54E-3085144No hitNo description
PROSITE profilePS5103221.31186143IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-2986144IPR001471AP2/ERF domain
SMARTSM003803.9E-3486149IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-2086143IPR016177DNA-binding domain
PRINTSPR003676.6E-98798IPR001471AP2/ERF domain
PRINTSPR003676.6E-9109125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
RDMSMVVLNQ DLNLRYEPMD FSNKRKPKSR RSGTNSVAET LAKWKDYNSR LETPLKESKP  60
IVKAPAKGSK KGCMKGKGGP ENSRCNYRGV RQRTWGKWVA EIREPHKGRR LWLGTFGTAL  120
EAALSYDAAA KAMYGHCARL NFPEYSSTKG ESSSRLTSSL SDSIGSSVSE ASHHGVSHRV  180
KTEADGEGFD FRHLETAPIL RVVKEEAKND GAKADEMFNV DELLAALDST PRNLPSAGDV  240
PPQNSAASSP SRGGPSNQQP HEYGLDFLKP GRQEDYNSML LDMFLDLDED MAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-1686143563ATERF1
3gcc_A4e-1686143563ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858842.16e-77PREDICTED: dehydration-responsive element-binding protein 2A-like
TrEMBLS8CZY00.0S8CZY0_9LAMI; Ethylene response factor 3 (Fragment)
STRINGMigut.F00629.1.p2e-76(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37012445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.24e-33DRE-binding protein 2A
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]