PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS72991.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

bZIP

Protein Properties

Length: 302aa MW: 34203 Da PI: 7.0194

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS72991.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.3	3.4e-08	182	228	17	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ el l+++ l +e+ EPS72991.1 182 AQRSRVRKLQYIAELERNVQALQAEGSQVSAELGFLNQQNLILSMEN 228 89**********************************99988887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.1E-5	170	241	No hit	No description
SMART	SM00338	3.3E-6	171	230	IPR004827	Basic-leucine zipper domain
CDD	cd14703	3.01E-15	173	221	No hit	No description
SuperFamily	SSF57959	5.19E-6	181	224	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence Send to blast
PPFPDYIPSS AVGSRALPSS REGNSYHHRT SSEILLIDEP PSWLDELLDE PDTPVRRGHR 60 RSSSDSFAYF DACAADDGKY VAQDDITFRD ITPLPLWGCQ DFGIRQHAQQ RSPLIGKNKN 120 KLWDRPVNSS IAAPPHADTN RSTLVDNHRD QVESAPRDQA ESSLLASATQ ESDTRRAKQQ 180 YAQRSRVRKL QYIAELERNV QALQAEGSQV SAELGFLNQQ NLILSMENKA LKQRLESMSQ 240 QHLIKCLEHE ILEREAARLR SLYQLQIQQQ QQATTPPSSG HGRTKSRDLD RQMADLSLKN 300 KE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087712.1	1e-110	uncharacterized protein At4g06598
Refseq	XP_011087714.1	1e-110	uncharacterized protein At4g06598
Refseq	XP_011087715.1	1e-110	uncharacterized protein At4g06598
Refseq	XP_011087716.1	1e-110	uncharacterized protein At4g06598
TrEMBL	S8D6F2	0.0	S8D6F2_9LAMI; Uncharacterized protein (Fragment)
STRING	XP_008218757.1	1e-99	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2765	17	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	1e-72	bZIP family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]