PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS72921.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | GeBP | ||||||||
Protein Properties | Length: 324aa MW: 36763.3 Da PI: 9.7203 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 115 | 4.5e-36 | 9 | 110 | 1 | 97 |
DUF573 1 klfqrlwseeDeivlLqGlidfkakt.gk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 klfqrlw++eDei lLqG++d+++++ g + ++d++afy+++k + +++++k+qlveK+rrLKkK+++ v+k++sgk+ +f+++hdq +fe+s+k EPS72921.1 9 KLFQRLWTDEDEIELLQGFLDYTTQRrGLysssQHHHDTSAFYDQIKCRFQLDFNKNQLVEKLRRLKKKYRNVVSKISSGKDYNFKSPHDQATFEISSK 107 579*******************776516586644556************************************************************** PP DUF573 95 iWg 97 iWg EPS72921.1 108 IWG 110 **8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 5.6E-34 | 11 | 110 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
KKPADESRKL FQRLWTDEDE IELLQGFLDY TTQRRGLYSS SQHHHDTSAF YDQIKCRFQL 60 DFNKNQLVEK LRRLKKKYRN VVSKISSGKD YNFKSPHDQA TFEISSKIWG NVNGSSAPFR 120 SPAVPIDEDD DDLNNPAFVS IQSPIPSAFD PNTSSKTPRP RKRNRPGSAV KLEEKQHQHQ 180 QQHHHHHHHP LFGHINNIPV QPQPQPQPQP QPPTVRPIAA APVLSMGISG VLSNVIEETV 240 KNSLSPVLKE LSSGSSNLLF ANGILSGSHS PLSLCFPGSM AGDKTSDDRW RKQQIMELEV 300 FSKRLELVQD HIRVQLQELR SMGN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020552957.1 | 1e-128 | probable transcription factor At3g04930 | ||||
TrEMBL | S8D698 | 0.0 | S8D698_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.N01941.1.p | 1e-112 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4052 | 24 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 8e-63 | DNA-binding storekeeper protein-related transcriptional regulator |
Publications ? help Back to Top | |||
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