PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS71374.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family Trihelix
Protein Properties Length: 451aa    MW: 49084.3 Da    PI: 7.4774
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS71374.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix60.83.2e-1999185186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  + +L+ea++++  +l+rg+l++ +We+v++ +  r   +++s +qCk+k +nl+kr+k ++++ +++   s s++p+f+q+e
  EPS71374.1  99 EWSDAAIATLLEAYSDKFVQLNRGNLRGRDWEDVAAIVseRCDNLTKSVEQCKNKVDNLKKRFKLERNRLSQG-GLSISHWPWFKQME 185
                 5*************************************7777899***************************9.89999********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.3E-2297186No hitNo description
Gene3DG3DSA:3.40.1160.102.0E-58237451IPR001048Aspartate/glutamate/uridylate kinase
SuperFamilySSF536331.44E-45243451IPR001048Aspartate/glutamate/uridylate kinase
CDDcd042541.06E-103245451No hitNo description
PfamPF006961.2E-18246451IPR001048Aspartate/glutamate/uridylate kinase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005737Cellular Componentcytoplasm
GO:0016740Molecular Functiontransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
VSVILTPSMA SCDDDFSLLD NHDNPNSTQP TAVAPAAQTP PYQIIPYDHD SDPFDSEPDP  60
NSLTGKRPGD RDDIQGSSTK RNRLHSTGGS VDYRKDREEW SDAAIATLLE AYSDKFVQLN  120
RGNLRGRDWE DVAAIVSERC DNLTKSVEQC KNKVDNLKKR FKLERNRLSQ GGLSISHWPW  180
FKQMEQVVGN SLAAKAVAED EKSSGGCSSA SFPTRHTKRL VTTTHNPGSQ INTIKPKQLN  240
NLRWRRVVFK ISGAALAGSA PNNIDPKVAM LIAREVSIAC RVGVEVAIVV GGRNFFCGDT  300
WVTSTGLDRC TAYQIGMMAT VMNSILLQSA LEKLGVQTRV QSAFAMPEVA EPYSRQRAIR  360
HLEKGRVVIF GGIGAGTGNP LFSTDTAAAL RASEIHADAV LKGTNVDSVF VCDSRNGGLA  420
AEHISFRELA SRGTSPMDMM AVTFCEENGI P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ek5_A4e-522394514214Uridylate kinase
3ek5_B4e-522394514214Uridylate kinase
3ek5_C4e-522394514214Uridylate kinase
3ek5_D4e-522394514214Uridylate kinase
3ek5_E4e-522394514214Uridylate kinase
3ek5_F4e-522394514214Uridylate kinase
3ek6_A4e-522394514214Uridylate kinase
3ek6_B4e-522394514214Uridylate kinase
3ek6_C4e-522394514214Uridylate kinase
3ek6_D4e-522394514214Uridylate kinase
3ek6_E4e-522394514214Uridylate kinase
3ek6_F4e-522394514214Uridylate kinase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00340DAPTransfer from AT3G10030Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101478.10.0uncharacterized protein LOC105179524
TrEMBLS8CVI70.0S8CVI7_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.L01743.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87282427
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.20.0Trihelix family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]