PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS70991.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family HD-ZIP
Protein Properties Length: 850aa    MW: 92803.8 Da    PI: 6.4083
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS70991.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.62.2e-181472357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  EPS70991.1 14 KYVRYTPEQVEALERVYAECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 72
                6789*****************************************************97 PP
2START148.17.9e-471623692204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e++ ka+ ++  Wv++  +++g++++ +++ s++ +g a+ra+g+v  +++  v+ell+d+  W  +++  ++  +i +g  g+++l++++ 
  EPS70991.1 162 IAEETLAEFLGKATGTAVDWVQMIGMKPGPDSIGIVAVSRNTKGVAARACGLVSLEPT-KVAELLKDRFSWFVDCRCHDVASAIPTGngGTIELIYMQV 259
                 68999*********************************999*****************.9********9****************************** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l++ Rdf+++Ry+ +l +g++v++++S++  +  p+   ++ +vRae+lpSg+l++p+++g+s +++v+h+d ++ +++++lr+l++s+ + ++
  EPS70991.1 260 YAPTTLASaRDFWTLRYTTSLDDGSLVVCERSLTTATGGPTgppNACFVRAEMLPSGFLVRPCEGGGSIIHIVDHFDFDAGSVPEVLRPLYESSKILAQ 358
                 ************************************999998999****************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k++ a+l++ +
  EPS70991.1 359 KMTIAALRHIR 369
                 ******99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.532973IPR001356Homeobox domain
SMARTSM003897.8E-161177IPR001356Homeobox domain
SuperFamilySSF466892.74E-161375IPR009057Homeodomain-like
CDDcd000868.57E-171474No hitNo description
PfamPF000465.5E-161472IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.5E-181672IPR009057Homeodomain-like
CDDcd146862.88E-666105No hitNo description
PROSITE profilePS5084822.496152380IPR002913START domain
Gene3DG3DSA:3.30.530.201.4E-18160366IPR023393START-like domain
SMARTSM002344.1E-41161371IPR002913START domain
SuperFamilySSF559615.49E-33162373No hitNo description
PfamPF018522.2E-44162369IPR002913START domain
PfamPF086701.4E-46705849IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009855Biological Processdetermination of bilateral symmetry
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0010072Biological Processprimary shoot apical meristem specification
GO:0080060Biological Processintegument development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    Send to blast
GGGNSKHQQA MDSKYVRYTP EQVEALERVY AECPKPSSIR RQQLIRECPI LSNIEPKQIK  60
VWFQNRRCRE KQRKESSRLQ SVNRKLTAMN KLLMEENDRL QKQVSQLVYD NGFMRQQLHT  120
VSTTTTDNSC DSVVMSGQPQ QQNPTPQHPQ RDANSPAGLL AIAEETLAEF LGKATGTAVD  180
WVQMIGMKPG PDSIGIVAVS RNTKGVAARA CGLVSLEPTK VAELLKDRFS WFVDCRCHDV  240
ASAIPTGNGG TIELIYMQVY APTTLASARD FWTLRYTTSL DDGSLVVCER SLTTATGGPT  300
GPPNACFVRA EMLPSGFLVR PCEGGGSIIH IVDHFDFDAG SVPEVLRPLY ESSKILAQKM  360
TIAALRHIRQ IAQETNGEIQ HNGGRQPAVL RSLSQKLCRG FNDAVNGFAD DGWSIMGSDG  420
VEDVTIAINS SPSKFLCSQY NNLSMLPMVG GVLCARASML LQNVSPALLV RFLREHRSEW  480
ADYGIDVYCA ASLKGSPYAV PCTKSGGFPS SQVILPLAQT AEHEEFLDVV RLGGHAFSPD  540
EMAMARDMYL LQLCSGSDET AAVSCSQLVF APIDESFGDD EAPLLASGFR VIPLEPKSNG  600
PAAAMRTLDL ASALEVGQNG GGGGCESRQV EANTQNLRSV LTIAFQFSFE NHYRDSVAAM  660
ARQYIRNIVG SVQRVAMAIA PSPLGSHLMP KSSPSSLPGS PEAVTLTRWI CRSYRMHTGS  720
ELIPGESLGG DGILKQLWRH SDAMVCCSVR MNASAVFTFA NQAGLDMLET TLVALQDILL  780
EKILDEAGRK VLLTEFPKIM QQGFAYLPGG VCVSSMGRPV SYEQALAWKV QNDEDNNHCL  840
AFMFMNWSFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096678.10.0homeobox-leucine zipper protein ATHB-14 isoform X2
SwissprotQ6AST10.0HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBLS8D0Z30.0S8D0Z3_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_009777911.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45724140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Itoh J,Hibara K,Sato Y,Nagato Y
    Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
    Plant Physiol., 2008. 147(4): p. 1960-75
    [PMID:18567825]
  3. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  4. Li YY, et al.
    Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
    Rice (N Y), 2016. 9(1): p. 46
    [PMID:27624698]