PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS70963.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | C2H2 | ||||||||
Protein Properties | Length: 250aa MW: 26646.6 Da PI: 9.0373 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.1 | 0.0003 | 87 | 109 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+sF + L H +H EPS70963.1 87 FTCKTCGRSFASFQALGGHRASH 109 89*********999998888877 PP | |||||||
2 | zf-C2H2 | 12.4 | 0.00048 | 166 | 188 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ F++ L H+r+H EPS70963.1 166 HECSYCSAEFTSGQALGGHMRKH 188 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 2.2E-11 | 86 | 111 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 2.47E-8 | 86 | 109 | No hit | No description |
SMART | SM00355 | 0.11 | 87 | 109 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 11.593 | 87 | 114 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 89 | 109 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 2.47E-8 | 161 | 188 | No hit | No description |
Pfam | PF13912 | 1.7E-12 | 165 | 190 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.026 | 166 | 188 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 10.45 | 166 | 193 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 168 | 188 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MEEASTEELD VPKGRRTKRF RPHSPLFATS SSSSSSSDKE STTTSEIDTA RCLILLSRGY 60 VASSPPPPAV AAVVPSSFSG ARSGGVFTCK TCGRSFASFQ ALGGHRASHS KPKNEQRSTV 120 MFSDEDDYFV PSTDHRNHSS LALRLNTAAA AAPPPPAKVA SSSRVHECSY CSAEFTSGQA 180 LGGHMRKHRG NNDGGSGSRN GFIARPSPSS NRTMMSIEEL QLLEMKKPRM GLTLDLNIPP 240 SDDGINGNNN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077260.1 | 2e-52 | zinc finger protein ZAT5 | ||||
TrEMBL | S8E5A7 | 0.0 | S8E5A7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F01919.1.p | 1e-47 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4015 | 23 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 5e-28 | C2H2 family protein |
Publications ? help Back to Top | |||
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