PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS70578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | MYB_related | ||||||||
Protein Properties | Length: 100aa MW: 11053.4 Da PI: 5.731 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.5 | 1.7e-09 | 1 | 24 | 23 | 47 |
-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47 +W++Ia++++ gRt++++k++w+++ EPS70578.1 1 RWSLIAARLP-GRTDNEIKNYWNTH 24 4*********.************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 3.12E-8 | 1 | 35 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 18.036 | 1 | 29 | IPR017930 | Myb domain |
Pfam | PF00249 | 1.8E-7 | 1 | 24 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 3.14E-7 | 1 | 25 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 3.6E-13 | 1 | 39 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence Send to blast |
RWSLIAARLP GRTDNEIKNY WNTHIKRKLV SRGIDPQTHK PVGCSSSTSP RSSPNPPPPP 60 SMDLEALPMQ AGEEESAENR SVLSEELAAE IDLELSIRPP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097098.1 | 1e-28 | myb-related protein 308 | ||||
TrEMBL | S8E4A6 | 2e-65 | S8E4A6_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_008781556.1 | 4e-24 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12 | 24 | 2154 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16720.1 | 1e-22 | myb domain protein 7 |
Publications ? help Back to Top | |||
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