PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS70568.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family HD-ZIP
Protein Properties Length: 694aa    MW: 76371 Da    PI: 5.9464
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS70568.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.4e-203791256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 k +++++ q++eLe++F+kn++p+++ r eLAk+lgL+ rqVk+WFqNrR++ k
  EPS70568.1 37 EKYHRHKSFQIQELEDYFKKNPHPDEKGRLELAKRLGLESRQVKFWFQNRRTQLK 91
                57788999*******************************************9987 PP
2START129.44.3e-412314472205
                 HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.......EEEEEEE CS
       START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla.......kaetlev 84 
                 la +a++el+k+a+++ep+W k +    e +n de+ ++f++  +     + +ea ra+g  + + + lve l+d + qW+e+++       + +++  
  EPS70568.1 231 LAVAAMEELMKLAQLAEPLWLKRPdgnvEFLNLDEYARTFTPCLGikpahFATEATRATGTAFITGVALVEALMDAN-QWTEMFPlsigratSDAIYSI 328
                 7899********************999999**********99766999999**************************.**********99966677777 PP

                 ECTT..EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHH CS
       START  85 issg..galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwl 180
                 i  +  g l+l +ae+q lsplv  R   f+R+++q+g++ w++vdvS+d    ++       +++lpSg+++++++ng+skv w+eh+++++  +  l
  EPS70568.1 329 IPGNrdGSLHLVQAEFQILSPLVGaRSAKFIRFSKQHGEDMWAVVDVSIDDLLGQQ-----GNCRRLPSGCIVQDLQNGYSKVMWIEHTEYDETGINHL 422
                 777799***********************************************988.....47889********************************* PP

                 HHHHHHHHHHHHHHHHHHHTXXXXX CS
       START 181 lrslvksglaegaktwvatlqrqce 205
                 ++++++sg+a ga++w+  lq  c+
  EPS70568.1 423 FQPVIQSGTALGAQKWLHDLQMRCQ 447
                 ******************9998885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.28E-192593IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-202893IPR009057Homeodomain-like
PROSITE profilePS5007117.6863393IPR001356Homeobox domain
SMARTSM003891.4E-163597IPR001356Homeobox domain
CDDcd000864.82E-183693No hitNo description
PfamPF000461.9E-173791IPR001356Homeobox domain
PROSITE patternPS0002706891IPR017970Homeobox, conserved site
PROSITE profilePS5084831.979221447IPR002913START domain
SuperFamilySSF559616.32E-22222447No hitNo description
CDDcd088752.28E-88225447No hitNo description
SMARTSM002343.9E-16230448IPR002913START domain
PfamPF018527.3E-34231447IPR002913START domain
SuperFamilySSF559614.4E-15486683No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    Send to blast
FEASLMKERT RDEPDGKSGT DDLNGLGLTN KSSSNKEKYH RHKSFQIQEL EDYFKKNPHP  60
DEKGRLELAK RLGLESRQVK FWFQNRRTQL KTQLERHENL ILKQENEKLC HENIVLRDAV  120
RSPMCDTCGG PAVLQEVPPE QLHLLIENAR LKDELERLGV VVTKFLNGTD GLMMPSVGCY  180
SKLDLAVGRG NNGSSWDHLM FPIGLELGNR VFSTPHPNVD SPFDKSVFLQ LAVAAMEELM  240
KLAQLAEPLW LKRPDGNVEF LNLDEYARTF TPCLGIKPAH FATEATRATG TAFITGVALV  300
EALMDANQWT EMFPLSIGRA TSDAIYSIIP GNRDGSLHLV QAEFQILSPL VGARSAKFIR  360
FSKQHGEDMW AVVDVSIDDL LGQQGNCRRL PSGCIVQDLQ NGYSKVMWIE HTEYDETGIN  420
HLFQPVIQSG TALGAQKWLH DLQMRCQLPF KIMSSGGDQP SGLSPGGKKS IVRLAQRMSR  480
GFCSGICGTG HQWEMVQNTD DTMLMIRKST TDNGEPPGVI LSAATTVHVP VSPGHLLEFL  540
QNEKTRGLWD SLSEDEAMQQ MVEIYKGQDS SNSISLLRAR VPSSNSTQSS VLVLQETTTD  600
VSGSLLVSAP VDAPAMNVVM NGGDPSGVAI LPSGFSIIPE CCSLDSGGQD EGSLLTVGFQ  660
ILVNSLSTSK LTMESVDTVK SLIARRLHGI KTGL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076208.10.0homeobox-leucine zipper protein ANTHOCYANINLESS 2
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLS8E4980.0S8E498_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.F00362.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]