PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS70204.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family GeBP
Protein Properties Length: 382aa    MW: 42790.4 Da    PI: 5.4958
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS70204.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57399.92.3e-31159259297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.....aksgkepsfskehdqkifelskki 95 
                 lfqr+wsee eivlL G+i+f ++++++p++ +++f+ f+k+++++++s++ql +Kir+L+kK+++ +k+     +++++ p+fsk+h++k++elskki
  EPS70204.1 159 LFQRIWSEESEIVLLEGMIEFLKEKKADPYSQLNDFHAFIKQKLNIDASRTQLQSKIRNLRKKYQNSKKRasknnTDEDEGPVFSKPHEHKSYELSKKI 257
                 79****************************************************************9999877666677789***************** PP

      DUF573  96 Wg 97 
                 Wg
  EPS70204.1 258 WG 259
                 *8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-28160259IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0016592Cellular Componentmediator complex
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MARNQEKTTR PDPVHDEKEE EQEDSSEEEV EEEEDEEEEG ENESGSGSEQ AQAFLKSPAL  60
PPQKAASGES SSEDQESGSD TESEERTPQK PVKKEAPKKT SSSDQKTAGG KRLADEKKPL  120
EAKSVAAKKA KTEPPSTSQQ DGKSQKKGAE PGTDAKKQLF QRIWSEESEI VLLEGMIEFL  180
KEKKADPYSQ LNDFHAFIKQ KLNIDASRTQ LQSKIRNLRK KYQNSKKRAS KNNTDEDEGP  240
VFSKPHEHKS YELSKKIWGD RDTEKSLGGK SKSAIAVLSK KTPMKKENGS TPTVVDNEVE  300
GSHNVNSRAG VVGISSFTTL DLLEHEKILA IGSEIFEGEK AVEGREEWER LRLEGMKLHM  360
KRLNVMSQQT KLLLDNWKPK NI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLS8CSF90.0S8CSF9_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.14e-22DNA-binding storekeeper protein-related transcriptional regulator
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]