PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS70002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | NAC | ||||||||
Protein Properties | Length: 230aa MW: 26213.8 Da PI: 9.6307 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.3 | 5.1e-52 | 4 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL kkv+++ ++ +i+evd++k+ePw+Lp k++ +ekew+fFs rd+ky+tg r+nrat++gyWkatgkdke+++ + EPS70002.1 4 LPPGFRFHPTDEELITHYLSKKVADHAFSS-VAIAEVDMNKIEPWELPWKTRIGEKEWFFFSVRDRKYPTGMRTNRATAAGYWKATGKDKEIFKGsCRV 101 79*************************998.67***************888999***************************************976677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vglkktLvfy grap+gekt+Wv heyrl EPS70002.1 102 AVGLKKTLVFYLGRAPRGEKTNWVSHEYRL 131 8***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.35E-56 | 3 | 151 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.722 | 4 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-27 | 5 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MDLLPPGFRF HPTDEELITH YLSKKVADHA FSSVAIAEVD MNKIEPWELP WKTRIGEKEW 60 FFFSVRDRKY PTGMRTNRAT AAGYWKATGK DKEIFKGSCR VAVGLKKTLV FYLGRAPRGE 120 KTNWVSHEYR LNHHSSHHQR NEWVISRVFQ KSSGGKKVHI STLISATATA TAGPSMSSNS 180 LTVPETVRHV HCFSELPPPM EFLPTPVHLT SDTWQNDIVG SSSDFDCIWR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 8e-57 | 4 | 157 | 20 | 174 | NAC domain-containing protein 19 |
3swm_B | 8e-57 | 4 | 157 | 20 | 174 | NAC domain-containing protein 19 |
3swm_C | 8e-57 | 4 | 157 | 20 | 174 | NAC domain-containing protein 19 |
3swm_D | 8e-57 | 4 | 157 | 20 | 174 | NAC domain-containing protein 19 |
3swp_A | 8e-57 | 4 | 157 | 20 | 174 | NAC domain-containing protein 19 |
3swp_B | 8e-57 | 4 | 157 | 20 | 174 | NAC domain-containing protein 19 |
3swp_C | 8e-57 | 4 | 157 | 20 | 174 | NAC domain-containing protein 19 |
3swp_D | 8e-57 | 4 | 157 | 20 | 174 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed post-transcriptionally by miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808, ECO:0000269|PubMed:18305205, ECO:0000305|PubMed:15723790}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009625550.1 | 2e-92 | PREDICTED: NAC domain-containing protein 100-like | ||||
Refseq | XP_016463159.1 | 2e-92 | PREDICTED: NAC domain-containing protein 100-like | ||||
Swissprot | Q9FLR3 | 5e-85 | NAC79_ARATH; NAC domain-containing protein 79 | ||||
TrEMBL | S8EBR6 | 1e-171 | S8EBR6_9LAMI; Uncharacterized protein | ||||
STRING | XP_009625550.1 | 6e-92 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA152 | 24 | 279 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07680.2 | 9e-86 | NAC domain containing protein 80 |
Publications ? help Back to Top | |||
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