PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS69544.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

Nin-like

Protein Properties

Length: 661aa MW: 73378.5 Da PI: 7.4861

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS69544.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	85.8	3.9e-27	423	474	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek i+l+dl+++F++++k+AA++Lgvc+T+LKr CRq+GI+RWP+R ik++ EPS69544.1 423 AEKAITLQDLRQHFAGTLKEAARNLGVCPTTLKRVCRQHGIQRWPSRTIKKV 474 5899**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.723	413	494	IPR003035	RWP-RK domain
Pfam	PF02042	1.4E-24	427	474	IPR003035	RWP-RK domain
SMART	SM00666	1.3E-19	583	661	IPR000270	PB1 domain
PROSITE profile	PS51745	25.792	583	661	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	4.4E-22	583	661	No hit	No description
SuperFamily	SSF54277	1.46E-20	584	661	No hit	No description
Pfam	PF00564	5.0E-18	585	661	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence Send to blast
WIDPPMASPT PVVDRLIQAL SHIRNSTTDA KLIQVWVPVD RGGGERVLTT NDQPFSLHPG 60 CPSLAHYREI SVDYHFPAED DSEGVLGLPG RVFRSRVPEW TPDVRFFTWD EYPRIVHARK 120 YDVRGSLVVP VLEEGSRSCL GVVEVVLTTQ KIRYRPELES VCKALEAVNL RAVELSSSSN 180 VNTSDSTYQA ALPEILHVLR SACFDHSLPL AQTWVSCISQ GKQGCRHSND NVKNCVSPVE 240 SACCIFDPHI RGFHEACSEY HLLKGLGVVG RAFNTNKPCF SNDVTSCSKT EYPLSHYAKM 300 FGLKGAVAIR LRSASTGSTD FVLEFFLPVN CEDSAEQKKL LISLSKTVQD CSQTLYVVTD 360 EETNYTVINE SKIAAAQSMA NHQESSSSTF KLGSKYDYTF VFSGSTSETL ATNRKKEKRR 420 IKAEKAITLQ DLRQHFAGTL KEAARNLGVC PTTLKRVCRQ HGIQRWPSRT IKKVDHSLKK 480 IQRVIESVHG ASNTVNIKPF SSNFTGRASS SRGFPESNTL DDLNLSERAP APAGLSVLPS 540 SSCSQSSSSS GSSNRSPASD GNNLVPIAPA AEETVPKSQE RNGPRVKVRS GEDSVRFRMQ 600 SNWSYSDLFH EISQRFGADD PDEFHLRYLD DESDWILLTC DADLDECIRL YRSSPKETIK 660 L

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence Send to blast

WIDPPMASPT PVVDRLIQAL SHIRNSTTDA KLIQVWVPVD RGGGERVLTT NDQPFSLHPG  60
CPSLAHYREI SVDYHFPAED DSEGVLGLPG RVFRSRVPEW TPDVRFFTWD EYPRIVHARK  120
YDVRGSLVVP VLEEGSRSCL GVVEVVLTTQ KIRYRPELES VCKALEAVNL RAVELSSSSN  180
VNTSDSTYQA ALPEILHVLR SACFDHSLPL AQTWVSCISQ GKQGCRHSND NVKNCVSPVE  240
SACCIFDPHI RGFHEACSEY HLLKGLGVVG RAFNTNKPCF SNDVTSCSKT EYPLSHYAKM  300
FGLKGAVAIR LRSASTGSTD FVLEFFLPVN CEDSAEQKKL LISLSKTVQD CSQTLYVVTD  360
EETNYTVINE SKIAAAQSMA NHQESSSSTF KLGSKYDYTF VFSGSTSETL ATNRKKEKRR  420
IKAEKAITLQ DLRQHFAGTL KEAARNLGVC PTTLKRVCRQ HGIQRWPSRT IKKVDHSLKK  480
IQRVIESVHG ASNTVNIKPF SSNFTGRASS SRGFPESNTL DDLNLSERAP APAGLSVLPS  540
SSCSQSSSSS GSSNRSPASD GNNLVPIAPA AEETVPKSQE RNGPRVKVRS GEDSVRFRMQ  600
SNWSYSDLFH EISQRFGADD PDEFHLRYLD DESDWILLTC DADLDECIRL YRSSPKETIK  660
L

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012838969.1	0.0	PREDICTED: protein NLP5-like
Swissprot	Q9SFW8	0.0	NLP5_ARATH; Protein NLP5
TrEMBL	S8CQT3	0.0	S8CQT3_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.N02963.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1598	24	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]