PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS69523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | NF-X1 | ||||||||
Protein Properties | Length: 1063aa MW: 115157 Da PI: 8.0999 | ||||||||
Description | NF-X1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-NF-X1 | 20.6 | 9.3e-07 | 294 | 311 | 1 | 18 |
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H+C+k CH G C+pC EPS69523.1 294 CGRHSCKKACHIGSCDPC 311 ****************** PP | |||||||
2 | zf-NF-X1 | 17.1 | 1.2e-05 | 358 | 375 | 1 | 18 |
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C +lCH+GpC++C EPS69523.1 358 CGNHFCLALCHPGPCGKC 375 ****************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57850 | 1.94E-5 | 117 | 186 | No hit | No description |
PROSITE profile | PS50016 | 8.867 | 124 | 185 | IPR019787 | Zinc finger, PHD-finger |
PROSITE profile | PS50089 | 9.303 | 127 | 183 | IPR001841 | Zinc finger, RING-type |
PROSITE pattern | PS01359 | 0 | 127 | 182 | IPR019786 | Zinc finger, PHD-type, conserved site |
SMART | SM00438 | 0.27 | 239 | 257 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 9.2 | 241 | 256 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 7.72E-11 | 284 | 332 | No hit | No description |
SMART | SM00438 | 6.5E-4 | 294 | 313 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 7.2E-4 | 294 | 311 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 1.24E-7 | 348 | 390 | No hit | No description |
SMART | SM00438 | 7.3E-4 | 358 | 377 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 1.5E-4 | 358 | 375 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 8.63E-12 | 406 | 452 | No hit | No description |
SMART | SM00438 | 1.6 | 416 | 435 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 0.071 | 416 | 433 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 51 | 474 | 508 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 16 | 474 | 485 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 2.72E-8 | 502 | 554 | No hit | No description |
SMART | SM00438 | 7.6E-4 | 512 | 531 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 3.6E-4 | 512 | 529 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 0.21 | 569 | 587 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 160 | 569 | 586 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 0.63 | 622 | 651 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 0.086 | 622 | 637 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 9.87E-5 | 649 | 698 | No hit | No description |
SMART | SM00438 | 0.083 | 660 | 681 | IPR000967 | Zinc finger, NF-X1-type |
Gene3D | G3DSA:3.30.70.330 | 3.2E-4 | 909 | 953 | IPR012677 | Nucleotide-binding alpha-beta plait domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009642 | Biological Process | response to light intensity | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009697 | Biological Process | salicylic acid biosynthetic process | ||||
GO:0010188 | Biological Process | response to microbial phytotoxin | ||||
GO:0010310 | Biological Process | regulation of hydrogen peroxide metabolic process | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000166 | Molecular Function | nucleotide binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1063 aa Download sequence Send to blast |
MNSTAPNRQQ KDNSNQRSRK NNPRNNRQEW VPRASLPVLA AQLPPIGVES SFQNEDGSGG 60 EAVDRPSMHS SGPNHALPRR SQTRSSVKLE EKGNYNRRIP AKVLNGVSIP QLVQEIQDKL 120 LKGAVECMIC YDMVQRSSPI WSCSSCYSIF HLSCTKKWAR APTSVDLLVE KNQGSNWRCP 180 GCQNVQLISA KEIRYVCFCG KRPDPPSDLY LTPHSCGEPC GKALERELPA DGMTSEYMCP 240 HLCVLQCHPG PCPPCTAFAP PRSCPCGKKV IATRCSDRRS ALTCGQICDR ILDCGRHSCK 300 KACHIGSCDP CEILIDASCF CKKNIETVPC GDIPVKGEIE SESGVFSCSS ICQKKLDCGN 360 HFCLALCHPG PCGKCDLSPS MIKSCCCGKT PLKEDRKSCL DPIPTCSQNC GKILPCGFHC 420 CSEKCHSGDC PPCHVLVTQK CRCGSASRTV ECFRTVSETE KFTCDKPCGQ KKSCGRHRCS 480 DRCCPLSHPS NSSSLDWDPH LCSMPCEKKL RCGQHSCRSL CHSGHCPPCM ETIFTDLSCA 540 CGRTSIPPPL PCGTAPPSCQ LPCLLPQPCG HPSSHSCHFG NCPTCSVPIS KECVGGHVVL 600 RNIPCGSKDI RCNQSCRKTR QCGLHSCTRA CHPPPCDSSQ ETSSSRSSCG QTCGAPRREC 660 RHSCTSLCHP STPCPDERCE IPVTITCSCG RMTASVPCDI GGSSNGYNGD TIREASIIHK 720 LPVSLQPMEG NNGQRMPLSQ RKLMCDDECL KMERKKVLAD AFGVSNPNLD ALHFGDDASS 780 SLSEALSDLL KRDTKWVLSV EERCKYLLLG RSRGITTSAV KVHVFCVMSK EKRDAVRLIV 840 ERWKLSVSSA GWEPKRFLVV HVAQKSKAPS RVLLGTKSPN PTATLQPPAF DPSVDMDPRL 900 VVALFDMPRD SDVSALVLRF GGECELVWLN DKNALAVFSD PARASTAMRR LDQGSVYHGA 960 AAFVPQKSGP PPSSVAGASS AAWGGSSTVA ASASAPSKGW KTAISKSGLE EWSSNRWSTL 1020 SQAGGGISSE RRAADPSSDE SGNNPPILSR DNTVVDDWEK AYE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Mediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011083338.1 | 0.0 | NF-X1-type zinc finger protein NFXL1 | ||||
Swissprot | Q9SY59 | 0.0 | NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1 | ||||
TrEMBL | S8E1J1 | 0.0 | S8E1J1_9LAMI; Uncharacterized protein | ||||
STRING | Migut.D01221.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9313 | 24 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10170.1 | 0.0 | NF-X-like 1 |
Publications ? help Back to Top | |||
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