PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS69047.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 126aa    MW: 14257.4 Da    PI: 10.4181
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS69047.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-16354155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++y GVr  + +g+++AeIrd +    +  r++lg+f taeeAa a+++a+ + +g
  EPS69047.1  3 CRYIGVR-ERAWGKYAAEIRDSTR---QgIRVWLGTFNTAEEAALAYDQAAFATRG 54
                689***9.777**********322...24**********************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.53E-27364No hitNo description
PfamPF008473.1E-11354IPR001471AP2/ERF domain
PROSITE profilePS5103220.969462IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-28462IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-21463IPR016177DNA-binding domain
SMARTSM003801.0E-30468IPR001471AP2/ERF domain
PRINTSPR003674.2E-9516IPR001471AP2/ERF domain
PRINTSPR003674.2E-92844IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
KKCRYIGVRE RAWGKYAAEI RDSTRQGIRV WLGTFNTAEE AALAYDQAAF ATRGSSTLLN  60
FPIDKVIESL QRMNYPFNQG LSPAKALKER NKSMSHNLKG GKRRRIKGKD LIVLEDLGSD  120
LLDELL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-24563361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-24563664ATERF1
3gcc_A1e-24563664ATERF1
5wx9_A1e-244621472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197103LKGGKRR
2101105KRRRI
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the GCC-box cis-acting elements found in the promoter regions of ethylene-responsive genes (PubMed:23057995). Acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates pathogen-responsive genes (PubMed:28733419). {ECO:0000269|PubMed:23057995, ECO:0000269|PubMed:28733419}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and infection with the fungal pathogen Botrytis cinerea. {ECO:0000269|PubMed:28733419}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838903.12e-57PREDICTED: ethylene-responsive transcription factor 1B-like
SwissprotA0A3Q7I5Y99e-42ERFC3_SOLLC; Ethylene-response factor C3
TrEMBLS8E9881e-87S8E988_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.K00942.1.p9e-57(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-25ethylene response factor 1
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Pirrello J, et al.
    Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene.
    BMC Plant Biol., 2012. 12: p. 190
    [PMID:23057995]
  3. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  4. Du M, et al.
    MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato.
    Plant Cell, 2017. 29(8): p. 1883-1906
    [PMID:28733419]