PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68940.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 100aa    MW: 11162.4 Da    PI: 8.4385
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68940.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-18151255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr +  +g+++AeIrd + +g   r +lg+f+taeeAa+a+++a+ +++g
  EPS68940.1  1 KYRGVRKRQ-WGKYAAEIRDIYGGG--GRKWLGTFDTAEEAARAYDRAAYEMRG 51
                7*****888.**********55543..8************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.906159IPR001471AP2/ERF domain
PfamPF008479.8E-12151IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-22161IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.2E-29161IPR001471AP2/ERF domain
CDDcd000184.12E-18160No hitNo description
SMARTSM003805.7E-32165IPR001471AP2/ERF domain
PRINTSPR003671.5E-10213IPR001471AP2/ERF domain
PRINTSPR003671.5E-102541IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    Send to blast
KYRGVRKRQW GKYAAEIRDI YGGGGRKWLG TFDTAEEAAR AYDRAAYEMR GRLAILNFPH  60
EYNMPSSSSH FASGSGSGSG RGNVIELECL DDKVLQDLLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-3119414114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015068552.16e-40ethylene-responsive transcription factor ERF096-like
SwissprotQ9LSX06e-31ERF96_ARATH; Ethylene-responsive transcription factor ERF096
SwissprotQ9LTC57e-31ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLS8CQD11e-67S8CQD1_9LAMI; Ethylene-responsive-element-binding factor 13 (Fragment)
STRINGSolyc03g005500.1.19e-38(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.13e-25Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]
  3. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]