PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68238.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family Trihelix
Protein Properties Length: 304aa    MW: 33988.6 Da    PI: 7.2209
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68238.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix895.3e-2812107186
    trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rWtkqe+l+Li+++r  e+r+rrg+           ++p+W++vs++++++g++r+p+qC+++w+nl++++kk+ke+e++ ++e++s +++ ++l+
  EPS68238.1  12 RWTKQEILVLIQGKRVAENRVRRGRvsgsgfggasHIEPKWSSVSSYCEKHGVNRGPVQCRKRWSNLAGDFKKVKEWESRVKDEAESFWVMRNDLR 107
                 8**********************8666667777779**********************************************999999*9999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.0E-1212102No hitNo description
PROSITE profilePS500906.4931279IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.607.8E-61278IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050777Biological Processnegative regulation of immune response
GO:0071219Biological Processcellular response to molecule of bacterial origin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
AEEGSRTARL PRWTKQEILV LIQGKRVAEN RVRRGRVSGS GFGGASHIEP KWSSVSSYCE  60
KHGVNRGPVQ CRKRWSNLAG DFKKVKEWES RVKDEAESFW VMRNDLRRER KLPGYFDREV  120
YDILDGNKGI DHAKFLGESS SALLPAADVN ADDPVTETLF DSGRSAAADD GLFSDSEQPG  180
REEPGQSSGK RKEAVGDIPA PIPISGNGPS HDRSIALGEE EEEQQQQQGR KRKRYDSEGE  240
KTTSNIEHRL VAALEKNGRL LSSQLEAQNS HLQLDREQRN EHFNGFLTVL NKLGDALSRI  300
ADKL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00288DAPTransfer from AT2G33550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848234.11e-132PREDICTED: uncharacterized protein LOC105968158
SwissprotQ8VZ202e-92ASR3_ARATH; Trihelix transcription factor ASR3
TrEMBLS8DY770.0S8DY77_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.K01061.1.p1e-132(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17862460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-84Trihelix family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Vidal EA, et al.
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.
    BMC Genomics, 2013. 14: p. 701
    [PMID:24119003]
  3. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]