PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67960.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 147aa    MW: 15395.3 Da    PI: 9.6743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67960.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.3e-161868256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                +ykG+r++k +g+Wv+eIr+p   g +  r +lg++ t++ Aa a++ a  +l+g+
  EPS67960.1 18 KYKGIRRRK-WGKWVSEIRVP---G-TpDRLWLGSYATPQAAAVAHDVAYYCLRGN 68
                8*****998.**********8...3.58*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.85E-171875IPR016177DNA-binding domain
PfamPF008479.9E-91867IPR001471AP2/ERF domain
CDDcd000185.10E-221879No hitNo description
SMARTSM003801.6E-251883IPR001471AP2/ERF domain
PROSITE profilePS5103220.8111877IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-241877IPR001471AP2/ERF domain
PRINTSPR003679.9E-81930IPR001471AP2/ERF domain
PRINTSPR003679.9E-84157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MGTSDAGDAA AAAAAAAKYK GIRRRKWGKW VSEIRVPGTP DRLWLGSYAT PQAAAVAHDV  60
AYYCLRGNSS PQNLNFPAVV PAGARIGMSP RSVQKAASDA GLGVDARLLD SMKRNGTPMY  120
SGDVRPEKAP GGNAAGEFLD ISVDDYL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.17e-64PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotO805425e-40ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLS8CMM11e-101S8CMM1_9LAMI; Uncharacterized protein
STRINGMigut.C01360.1.p3e-63(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.17e-42ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]