PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS67777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | GRF | ||||||||
Protein Properties | Length: 114aa MW: 12927.6 Da PI: 10.9383 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 80.5 | 1.6e-25 | 59 | 103 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 daepgrCrRtDGKkWRCsr++++++k+CErH++rgr rsrk++e EPS67777.1 59 DAEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRPRSRKPVEG 103 79****************************************986 PP | |||||||
2 | QLQ | 49.1 | 1.7e-17 | 1 | 36 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+++L++ +l+ +y+aan+PvPp+Ll+++++ EPS67777.1 1 PFTPSQWMELEHHALIHRYIAANVPVPPNLLLPLKR 36 8********************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51666 | 21.191 | 1 | 36 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
SMART | SM00951 | 3.3E-6 | 1 | 36 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
Pfam | PF08880 | 8.4E-12 | 1 | 34 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51667 | 25.01 | 59 | 103 | IPR014977 | WRC domain |
Pfam | PF08879 | 5.9E-22 | 60 | 102 | IPR014977 | WRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence Send to blast |
PFTPSQWMEL EHHALIHRYI AANVPVPPNL LLPLKRSHTS DLRMSALRWG SFPLGFSGDA 60 EPGRCRRTDG KKWRCSRDAV PDQKYCERHI NRGRPRSRKP VEGQNGHASS SSSS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. | |||||
UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015890408.1 | 8e-52 | growth-regulating factor 1 isoform X1 | ||||
Swissprot | Q6AWY2 | 1e-47 | GRF7_ORYSJ; Growth-regulating factor 7 | ||||
Swissprot | Q6AWY3 | 1e-47 | GRF6_ORYSJ; Growth-regulating factor 6 | ||||
TrEMBL | S8E5W6 | 5e-79 | S8E5W6_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | EMJ09229 | 4e-50 | (Prunus persica) | ||||
STRING | XP_010273541.1 | 3e-50 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1688 | 23 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22840.1 | 1e-40 | growth-regulating factor 1 |
Publications ? help Back to Top | |||
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