PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67711.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 152aa    MW: 16439.2 Da    PI: 7.8187
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67711.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19755254
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                +++GVr+++ +g+Wv+eIr+p     +  +r++lg+f taeeAa+a+++a++ + 
  EPS67711.1  7 RFRGVRQRH-WGSWVSEIRHP-----QlkTRIWLGTFETAEEAARAYDEAARIMC 55
                69******9.**********9.....445**********************9775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.21E-28671No hitNo description
SuperFamilySSF541711.31E-17758IPR016177DNA-binding domain
PROSITE profilePS5103219.928770IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-30771IPR001471AP2/ERF domain
SMARTSM003802.7E-35776IPR001471AP2/ERF domain
PfamPF008472.3E-12754IPR001471AP2/ERF domain
PRINTSPR003673.9E-11819IPR001471AP2/ERF domain
PRINTSPR003673.9E-113046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MGRPQQRFRG VRQRHWGSWV SEIRHPQLKT RIWLGTFETA EEAARAYDEA ARIMCGGGGG  60
GGSKPRTNFP NEVRSSSSSS GGNLLSANLV AKLQRCEAAC PKSQDHGRRT NAVAVPGGGG  120
GELTARCDDD DDEIQQMIQE LLHCDTCSTA PN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-14675468ATERF1
3gcc_A7e-14675468ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498778.12e-48ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW51e-42ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLS8CS671e-109S8CS67_9LAMI; Uncharacterized protein
STRINGXP_004498778.11e-47(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13622476
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.11e-24ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]