PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67427.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 115aa    MW: 13609.3 Da    PI: 10.9767
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67427.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.4e-1663104246
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr..krfslgkfgtaeeAakaa 46 
                  + GVr +k +g+++AeIrd +     +  kr++lg+f taeeAa+a+
  EPS67427.1  63 NFVGVRKRK-WGKYAAEIRDpF-----HkgKRVWLGTFATAEEAAEAY 104
                 689***999.**********55.....235*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.2E-1063106IPR001471AP2/ERF domain
PROSITE profilePS5103217.54363115IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-2163111IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1663109IPR016177DNA-binding domain
SMARTSM003801.2E-1363110IPR001471AP2/ERF domain
PRINTSPR003676.8E-96475IPR001471AP2/ERF domain
PRINTSPR003676.8E-987103IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
HKNQSIVFRS RRYRLILRRI RGSAEEEFEE ESLRNRAAEA GSVSDQLLDF EFARGNRHRR  60
PSNFVGVRKR KWGKYAAEIR DPFHKGKRVW LGTFATAEEA AEAYTSRKRE IEEKL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9M9B21e-16EF117_ARATH; Ethylene-responsive transcription factor ERF117
TrEMBLS8E5194e-76S8E519_9LAMI; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.11e-13ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]