PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS67384.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 219aa MW: 24737.3 Da PI: 10.5032 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.2 | 1.1e-11 | 53 | 99 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + Er RR+++ + f+ L+++lP+ + ++ K K i +Av+YIk+Lq EPS67384.1 53 IKERLRREQMSQNFFVLQSMLPSlP---KNVKIAKEKIANEAVNYIKYLQ 99 67*********************66...*********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 6.54E-13 | 45 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.557 | 46 | 98 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.0E-6 | 52 | 104 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.2E-9 | 53 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.51E-7 | 53 | 99 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.9E-11 | 54 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS51671 | 10.08 | 149 | 219 | IPR002912 | ACT domain |
CDD | cd02116 | 0.00495 | 150 | 187 | No hit | No description |
SuperFamily | SSF55021 | 1.46E-5 | 150 | 214 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 1.8E-4 | 152 | 214 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MDDRWKKRQE EAAAKRSSDD STSLRFGRIL KNAADAGGRS SSTGKRKSEG NLIKERLRRE 60 QMSQNFFVLQ SMLPSLPKNV KIAKEKIANE AVNYIKYLQG EASRLESKKA QFEEATMAEA 120 VAMRRCGNSS SKSSSPPLVR VFIPRTARFF AVECPNRPGT VTHILKVFEN HEAEVLEARI 180 SVDDRRELLT FTSTLLLLPT DDAPATLDRL RNEILLLRI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | S8CJP8 | 1e-158 | S8CJP8_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13248 | 14 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.3 | 3e-07 | bHLH family protein |
Publications ? help Back to Top | |||
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