PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS67147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 26574.4 Da PI: 6.1729 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26 | 1.6e-08 | 163 | 210 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L+el+P + +k a +L + +++++ Lq EPS67147.1 163 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQALQ 210 8*************************9....788888999999999999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.79E-8 | 157 | 214 | No hit | No description |
SuperFamily | SSF47459 | 1.83E-15 | 157 | 230 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.386 | 159 | 209 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.8E-14 | 159 | 225 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.9E-6 | 163 | 210 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.5E-8 | 165 | 215 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MEPAVVEAQF RSAPKDGEEM GFVLDEIQGL ISVPPETESS SFTALLELPP PKAVELLVKE 60 DFTDEHPICP SDFAVASMFS VFPAASTENS LESTVIFSRM VKQEPLDPHP HSCSDKTVNP 120 SKRKHKEKQV KESNKKIKKA GGANDEKLPY VHVRARRGQA TDSHSLAERA RREKINARMK 180 LLQELVPGCN KISGTALVLD EIINHVQALQ RQVEFLSMRI AAVDPRIDFP PFDCLLPPE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011078863.1 | 1e-87 | transcription factor bHLH48 | ||||
Swissprot | Q8VZ02 | 3e-53 | BH048_ARATH; Transcription factor bHLH48 | ||||
TrEMBL | S8E4B1 | 1e-174 | S8E4B1_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.K00063.1.p | 1e-84 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4029 | 23 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57800.2 | 1e-56 | bHLH family protein |
Publications ? help Back to Top | |||
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