PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67112.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 209aa    MW: 23404.3 Da    PI: 8.3968
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67112.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.52.6e-2153103155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+G+r+++ +g+W+AeIrdp++     r++lg+++taeeAa+a++ a++k++g
  EPS67112.1  53 SVYRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTYDTAEEAARAYDSAARKIRG 103
                 78********.**********954...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.9E-1553103IPR001471AP2/ERF domain
CDDcd000188.33E-3453113No hitNo description
SuperFamilySSF541715.43E-2453112IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.5E-3354112IPR001471AP2/ERF domain
PROSITE profilePS5103225.14654111IPR001471AP2/ERF domain
SMARTSM003803.4E-3854117IPR001471AP2/ERF domain
PRINTSPR003676.0E-125566IPR001471AP2/ERF domain
PRINTSPR003676.0E-127793IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0034059Biological Processresponse to anoxia
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MCGGAILAGL IPRRGVPPEF WPDAAAQSVT AFPHKRPLPS STVEKPKKKQ RKSVYRGIRR  60
RPWGKWAAEI RDPRKGVRVW LGTYDTAEEA ARAYDSAARK IRGTKAKLNF PDLEHDALNY  120
IDFGYSDGVK SEQFDSSDDN RGGKTIDQKV QNESAPAVEN ELQKLSKDLM AYENFMDFFQ  180
IPYLDGVSDA APSTNPPPAS AELWNFEDL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-23551111572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14660KKKQRKSVYRGIRRR
24761KKQRKSVYRGIRRRP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079624.12e-71ethylene-responsive transcription factor ERF071
TrEMBLS8E4861e-153S8E486_9LAMI; Ethylene response factor 2 (Fragment)
STRINGMigut.D00130.1.p1e-60(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA71182329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.15e-38ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]