PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS67083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | Trihelix | ||||||||
Protein Properties | Length: 254aa MW: 28289.1 Da PI: 9.7235 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 59.7 | 7.5e-19 | 28 | 111 | 1 | 82 |
trihelix 1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 rWt++e+l+Li+++r e+r++ g ++ p+W ++s+++ ++r p qC+++w+nl+++++kik++e++ +++s s +++ EPS67083.1 28 RWTQKEILVLIQGKRAAENRVGIGPastgsgQISPKWCSISNYC----VNRCPAQCRKRWSNLSGDFRKIKAWESEVKEGSDSFWAMR 111 8*********************864444555************9....799*************************988888777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 8.2E-7 | 28 | 111 | No hit | No description |
PROSITE profile | PS50090 | 6.771 | 28 | 87 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 8.3E-7 | 28 | 86 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.22E-5 | 29 | 96 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MLFESLSPGR DPVDGGAGSK AAAARLPRWT QKEILVLIQG KRAAENRVGI GPASTGSGQI 60 SPKWCSISNY CVNRCPAQCR KRWSNLSGDF RKIKAWESEV KEGSDSFWAM RKDSRRERKL 120 PGSFDREVYD ILSGADAGQE GVGRSSVKRK WTAPIPISGL NCAISSPRHS IFITAPEKHY 180 PSEDPPRAGR EKCEFEYELV VAALESNGRL LRPRLEAQNA NLRLEREQRD EHLNRLSTVL 240 DKVADAVCRI ADKL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086880.2 | 5e-70 | LOW QUALITY PROTEIN: trihelix transcription factor ASR3 | ||||
Swissprot | Q8VZ20 | 1e-65 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | S8DV89 | 0.0 | S8DV89_9LAMI; Uncharacterized protein | ||||
STRING | XP_006410499.1 | 5e-66 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1786 | 24 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 6e-68 | Trihelix family protein |
Publications ? help Back to Top | |||
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