PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EPS66836.1

Organism

Genlisea aurea

Taxonomic ID

192259

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea

Family

STAT

Protein Properties

Length: 625aa MW: 70149.8 Da PI: 8.057

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EPS66836.1	genome	LSMU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	179.5	4.8e-56	161	277	1	117
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfle 99 ldv+l++ lg pv+kd+ev asLly d+ l+ve ++d e+pLL+sydG+e++s drp+kl++Gras+klkisqLsskcdnrLfrikf++p+l kypfle EPS66836.1 161 LDVTLSDVLGSPVNKDIEVLASLLYVDNHLPVESTSDGEPPLLTSYDGIEYASWDRPAKLVNGRASLKLKISQLSSKCDNRLFRIKFCVPRLGKYPFLE 259 89*********************************************************************************************** PP STAT 100 avskpirCisrsrntrss 117 a s pirC+sr++n++++ EPS66836.1 260 AWSPPIRCVSRNKNAKTV 277 ************9865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF49899	5.41E-5	32	120	IPR013320	Concanavalin A-like lectin/glucanase domain
PROSITE profile	PS50001	9.426	530	625	IPR000980	SH2 domain

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence Send to blast
PFLCLGEKKK MNLFPLLYLH KEAPDPDTYK SSSSIRVVSS EVEFPLKKWV HIGCRVLRDF 60 ITLYIDGEVA GERHLASMFE KELHEDVLKR LYLGCPHQTG SSLNGYVHRV DVMPSSSTSS 120 VRNHRVQNPP LQLYIDHSSA SEIEDDSSGV WSASCRRIFS LDVTLSDVLG SPVNKDIEVL 180 ASLLYVDNHL PVESTSDGEP PLLTSYDGIE YASWDRPAKL VNGRASLKLK ISQLSSKCDN 240 RLFRIKFCVP RLGKYPFLEA WSPPIRCVSR NKNAKTVLPW RRCSNKTHDV NGCQCSASDD 300 RSVELIPNII HEAKPSPSSK RIKLGQDKPY SFFREQRGGG AYNGFGLQAA NGNHKVVESN 360 SSASNSGEGT TRSVSSPVSD SVVFKYCLGG TAERCQLLKE IVLSASDEQI VDFAKQVSLF 420 SGCSHHRHQI ELSKRLVQDG VRAWTSVSAG KNQVLWDNLM VTINECFMKI AGCRRPLLDQ 480 DLECLRRLAG CGETVSKENF EKLWSWLYPV AYTLSRSEVT PMWDSLSPLW IEGFFVTKER 540 AESMLLECSV RRTPGEFVVR FPTTRSWPHP DAGSPVVTYL GSDSRTIRHR LVSLDSISSS 600 KRFFFVGWAL QDLLAEQPEL SELCR

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence Send to blast

PFLCLGEKKK MNLFPLLYLH KEAPDPDTYK SSSSIRVVSS EVEFPLKKWV HIGCRVLRDF  60
ITLYIDGEVA GERHLASMFE KELHEDVLKR LYLGCPHQTG SSLNGYVHRV DVMPSSSTSS  120
VRNHRVQNPP LQLYIDHSSA SEIEDDSSGV WSASCRRIFS LDVTLSDVLG SPVNKDIEVL  180
ASLLYVDNHL PVESTSDGEP PLLTSYDGIE YASWDRPAKL VNGRASLKLK ISQLSSKCDN  240
RLFRIKFCVP RLGKYPFLEA WSPPIRCVSR NKNAKTVLPW RRCSNKTHDV NGCQCSASDD  300
RSVELIPNII HEAKPSPSSK RIKLGQDKPY SFFREQRGGG AYNGFGLQAA NGNHKVVESN  360
SSASNSGEGT TRSVSSPVSD SVVFKYCLGG TAERCQLLKE IVLSASDEQI VDFAKQVSLF  420
SGCSHHRHQI ELSKRLVQDG VRAWTSVSAG KNQVLWDNLM VTINECFMKI AGCRRPLLDQ  480
DLECLRRLAG CGETVSKENF EKLWSWLYPV AYTLSRSEVT PMWDSLSPLW IEGFFVTKER  540
AESMLLECSV RRTPGEFVVR FPTTRSWPHP DAGSPVVTYL GSDSRTIRHR LVSLDSISSS  600
KRFFFVGWAL QDLLAEQPEL SELCR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011082815.1	0.0	uncharacterized protein LOC105165486
TrEMBL	S8CPW0	0.0	S8CPW0_9LAMI; Uncharacterized protein (Fragment)
STRING	Migut.M00685.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9394	23	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	1e-156	SH2 domain protein B

Publications ? help Back to Top
Leushkin EV, et al. The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences. BMC Genomics, 2013. 14: p. 476 [PMID:23855885]